RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 MST1RQ04912 1400 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 MYO1BO43795 1136 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 MAP3K9P80192 1104 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 MDM2Q00987 491 aaPredicted RBP21.17■□□□□ 0.98
HPS3-204ENST00000462030 TEX35Q5T0J7 233 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 CC2D1AQ6P1N0 951 aaPredicted RBP21.17■□□□□ 0.98
HPS3-204ENST00000462030 MAN1B1Q9UKM7 699 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 AKAP11Q9UKA4 1901 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 IARSP41252 1262 aaKnown RBP21.17■□□□□ 0.98
HPS3-204ENST00000462030 GRIN1Q05586 938 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 ZNF827Q17R98 1081 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 TRMT44Q8IYL2 757 aaKnown RBP21.17■□□□□ 0.98
HPS3-204ENST00000462030 FAM217BQ9NTX9 383 aaPredicted RBP21.17■□□□□ 0.98
HPS3-204ENST00000462030 MRFAP1Q9Y605 127 aa21.17■□□□□ 0.98
HPS3-204ENST00000462030 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 TPM1P09493 284 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 PRR29P0C7W0 189 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 ADD2P35612 726 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 PPP2R3AQ06190 1150 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 CPLX2Q6PUV4 134 aaKnown RBP21.16■□□□□ 0.98
HPS3-204ENST00000462030 KIFC2Q96AC6 838 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 DESI2Q9BSY9 194 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 UBXN6Q9BZV1 441 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 INCENPQ9NQS7 918 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 NFE2L3Q9Y4A8 694 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 ZBTB43O43298 467 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 APPP05067 770 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 IRX5P78411 483 aaPredicted RBP21.16■□□□□ 0.98
HPS3-204ENST00000462030 TAF7LQ5H9L4 462 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 STK11IPQ8N1F8 1099 aa21.16■□□□□ 0.98
HPS3-204ENST00000462030 PARP4Q9UKK3 1724 aaKnown RBP21.16■□□□□ 0.98
HPS3-204ENST00000462030 GOLGA8AA7E2F4 631 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 HNRNPH2P55795 449 aaKnown RBP21.15■□□□□ 0.98
HPS3-204ENST00000462030 TRIM29Q14134 588 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 SLC9C2Q5TAH2 1124 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 NFXL1Q6ZNB6 911 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 KRI1Q8N9T8 703 aaKnown RBP21.15■□□□□ 0.98
HPS3-204ENST00000462030 ZCCHC17Q9NP64 241 aaKnown RBP21.15■□□□□ 0.98
HPS3-204ENST00000462030 TMEM51Q9NW97 253 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 RIC1Q4ADV7 1423 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 UBR2Q8IWV8 1755 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 STX10O60499 249 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 SPECC1LQ69YQ0 1117 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 NEK11Q8NG66 645 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 FAM89AQ96GI7 184 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 CCDC34Q96HJ3 373 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 ISCA1Q9BUE6 129 aa21.15■□□□□ 0.98
HPS3-204ENST00000462030 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.98
HPS3-204ENST00000462030 ABCC12Q96J65 1359 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 ZNF18P17022 549 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 OAS2P29728 719 aaKnown RBP21.14■□□□□ 0.98
HPS3-204ENST00000462030 KARSQ15046 597 aaKnown RBP21.14■□□□□ 0.98
HPS3-204ENST00000462030 POSTNQ15063 836 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 RSRC2Q7L4I2 434 aaKnown RBP21.14■□□□□ 0.98
HPS3-204ENST00000462030 GRAMD1CQ8IYS0 662 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 GPR161Q8N6U8 529 aaKnown RBP21.14■□□□□ 0.98
HPS3-204ENST00000462030 IGDCC4Q8TDY8 1250 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 SLC26A6Q9BXS9 759 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 LY9Q9HBG7 655 aa21.14■□□□□ 0.98
HPS3-204ENST00000462030 KCPQ6ZWJ8 1503 aa21.14■□□□□ 0.97
HPS3-204ENST00000462030 GOLGA6L9A6NEM1 432 aa21.14■□□□□ 0.97
HPS3-204ENST00000462030 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
HPS3-204ENST00000462030 CDK11BP21127 795 aaKnown RBP21.14■□□□□ 0.97
HPS3-204ENST00000462030 ST5P78524 1137 aa21.14■□□□□ 0.97
HPS3-204ENST00000462030 DHX58Q96C10 678 aa21.14■□□□□ 0.97
HPS3-204ENST00000462030 MED15Q96RN5 788 aa21.14■□□□□ 0.97
HPS3-204ENST00000462030 ZNF330Q9Y3S2 320 aaPredicted RBP21.14■□□□□ 0.97
HPS3-204ENST00000462030 ATP8B1O43520 1251 aa21.13■□□□□ 0.97
HPS3-204ENST00000462030 MTF1Q14872 753 aa21.13■□□□□ 0.97
HPS3-204ENST00000462030 PIH1D3Q9NQM4 214 aaKnown RBP21.13■□□□□ 0.97
HPS3-204ENST00000462030 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
HPS3-204ENST00000462030 FBXO3Q9UK99 471 aa21.13■□□□□ 0.97
HPS3-204ENST00000462030 ZNF142P52746 1687 aaPredicted RBP21.13■□□□□ 0.97
HPS3-204ENST00000462030 BTBD18B2RXH4 712 aa21.13■□□□□ 0.97
HPS3-204ENST00000462030 TOB1P50616 345 aaPredicted RBP21.13■□□□□ 0.97
HPS3-204ENST00000462030 PARD6BQ9BYG5 372 aa21.13■□□□□ 0.97
HPS3-204ENST00000462030 POLR2DO15514 142 aaKnown RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 IDH1O75874 414 aaKnown RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 GUCY1A2P33402 732 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 TMEM67Q5HYA8 995 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 NOSTRINQ8IVI9 506 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 TMEM87BQ96K49 555 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 MRPL44Q9H9J2 332 aaKnown RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 SAMSN1Q9NSI8 373 aaKnown RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 IFIT5Q13325 482 aaKnown RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 METTL24Q5JXM2 366 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 PROSER2Q86WR7 435 aaPredicted RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 SMARCE1Q969G3 411 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 IRX2Q9BZI1 471 aaPredicted RBP21.12■□□□□ 0.97
HPS3-204ENST00000462030 ATRNO75882 1429 aa21.12■□□□□ 0.97
HPS3-204ENST00000462030 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 SMC1AQ14683 1233 aaKnown RBP21.11■□□□□ 0.97
HPS3-204ENST00000462030 SYNE4Q8N205 404 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 SEC31BQ9NQW1 1179 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 FBXO2Q9UK22 296 aaPredicted RBP21.11■□□□□ 0.97
HPS3-204ENST00000462030 KCNJ14Q9UNX9 436 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 SSRP1Q08945 709 aaKnown RBP21.11■□□□□ 0.97
HPS3-204ENST00000462030 MORC3Q14149 939 aa21.11■□□□□ 0.97
HPS3-204ENST00000462030 ENOX1Q8TC92 643 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms