RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
TMEM39A-203ENST00000461654 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
TMEM39A-203ENST00000461654 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
TMEM39A-203ENST00000461654 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
TMEM39A-203ENST00000461654 DZIP1Q86YF9 867 aaKnown RBP18.15■□□□□ 0.5
TMEM39A-203ENST00000461654 SEC62Q99442 399 aaKnown RBP18.15■□□□□ 0.5
TMEM39A-203ENST00000461654 IL25Q9H293 177 aa18.15■□□□□ 0.5
TMEM39A-203ENST00000461654 MAST3O60307 1309 aa18.15■□□□□ 0.5
TMEM39A-203ENST00000461654 UBE2Q2LH0YL09 131 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 CYP7A1P22680 504 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 GSTO1P78417 241 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 LDLRAD1Q5T700 205 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 MOB2Q70IA6 237 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 ARMC9Q7Z3E5 817 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 RASAL3Q86YV0 1011 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 OSBP2Q969R2 916 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 DDRGK1Q96HY6 314 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 SAGE1Q9NXZ1 904 aa18.14■□□□□ 0.49
TMEM39A-203ENST00000461654 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 M0R2C6 588 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 CHGBP05060 677 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 MAP3K11Q16584 847 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 SUPT20HL1Q3ZLR7 823 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 SPDYE2Q495Y8 402 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 RNF20Q5VTR2 975 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
TMEM39A-203ENST00000461654 TCRBV5S4A2TA0A5A2 114 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 LDHCP07864 332 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 CRKP46108 304 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 ANAPC15P60006 121 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 PTH1RQ03431 593 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 TTLL12Q14166 644 aaPredicted RBP18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 GRIK5Q16478 980 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 SLFNL1Q499Z3 407 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 SLF2Q8IX21 1173 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 MAP4K1Q92918 833 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 NOL10Q9BSC4 688 aaKnown RBP18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 DSCC1Q9BVC3 393 aa18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 PUS7LQ9H0K6 701 aaKnown RBP18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 ZNF70Q9UC06 446 aaPredicted RBP18.12■□□□□ 0.49
TMEM39A-203ENST00000461654 CLRN2A0PK11 232 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 GPAA1O43292 621 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 HSPA4P34932 840 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 MECOMQ03112 1051 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 TNFAIP1Q13829 316 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 NSUN4Q96CB9 384 aaKnown RBP18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 ECM29Q5VYK3 1845 aa18.11■□□□□ 0.49
TMEM39A-203ENST00000461654 MYH13Q9UKX3 1938 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 DOCK2Q92608 1830 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 MAGEB6P1A0A0J9YX57 407 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 PPP1R12BO60237 982 aaPredicted RBP18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 GNAT2P19087 354 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 PRDX5P30044 214 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 RASA3Q14644 834 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 TDRD3Q9H7E2 651 aaKnown RBP18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 VEZTQ9HBM0 779 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 RNF186Q9NXI6 227 aa18.1■□□□□ 0.49
TMEM39A-203ENST00000461654 MBD4O95243 580 aa18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 APPP05067 770 aa18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 RABEP1Q15276 862 aa18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 TEKT1Q969V4 418 aa18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 ANGEL1Q9UNK9 670 aaKnown RBP18.09■□□□□ 0.49
TMEM39A-203ENST00000461654 MYH7P12883 1935 aa18.08■□□□□ 0.49
TMEM39A-203ENST00000461654 BAG3O95817 575 aa18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 HSPD1P10809 573 aaKnown RBP18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 TM4SF4P48230 202 aa18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 NBPF12Q5TAG4 269 aaPredicted RBP18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 CERS3Q8IU89 383 aa18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 IL27Q8NEV9 243 aa18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 NACAP1Q9BZK3 213 aa18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 SSC5DA1L4H1 1573 aa18.08■□□□□ 0.48
TMEM39A-203ENST00000461654 BECN1Q14457 450 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 NECTIN1Q15223 517 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 FKBP1CQ5VVH2 108 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 CREB3L3Q68CJ9 461 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 TEPSINQ96N21 525 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 STRBPQ96SI9 672 aaKnown RBP18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 ARMT1Q9H993 441 aa18.07■□□□□ 0.48
TMEM39A-203ENST00000461654 RPAP1Q9BWH6 1393 aaPredicted RBP18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 USP2O75604 605 aaPredicted RBP18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 TNNI2P48788 182 aa18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 PRKG1Q13976 671 aa18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 KRT32Q14532 448 aa18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 VPS53Q5VIR6 699 aa18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 SPRYD7Q5W111 196 aa18.06■□□□□ 0.48
TMEM39A-203ENST00000461654 MAST2Q6P0Q8 1798 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 PATL2C9JE40 543 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms