RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GRIN3AQ8TCU5 1115 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 SSBP4Q9BWG4 385 aaPredicted RBP4.74□□□□□ -1.65
VCL-203ENST00000461383 SRRTQ9BXP5 876 aaKnown RBP4.74□□□□□ -1.65
VCL-203ENST00000461383 ZNF408Q9H9D4 720 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 GSTP1P09211 210 aaKnown RBP4.73□□□□□ -1.65
VCL-203ENST00000461383 CRKP46108 304 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 AFF1P51825 1210 aaKnown RBP4.73□□□□□ -1.65
VCL-203ENST00000461383 RAC1P63000 192 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 PIP4K2BP78356 416 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 RBL2Q08999 1139 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 PDE3AQ14432 1141 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 ARTNQ5T4W7 220 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 RASIP1Q5U651 963 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 GK5Q6ZS86 529 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 NOP9Q86U38 636 aaKnown RBP4.73□□□□□ -1.65
VCL-203ENST00000461383 TXNRD3Q86VQ6 643 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 SLITRK4Q8IW52 837 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 FMR1NBQ8N0W7 255 aaPredicted RBP4.73□□□□□ -1.65
VCL-203ENST00000461383 DTWD1Q8N5C7 304 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 STK35Q8TDR2 534 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 WNT8BQ93098 351 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 OSBPL2Q9H1P3 480 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 SOX17Q9H6I2 414 aaPredicted RBP4.73□□□□□ -1.65
VCL-203ENST00000461383 PPT2Q9UMR5 302 aa4.73□□□□□ -1.65
VCL-203ENST00000461383 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 FSCN2O14926 492 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 TRIM37O94972 964 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 EIF6P56537 245 aaKnown RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 RPL6Q02878 288 aaKnown RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 BMS1Q14692 1282 aaKnown RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 POU4F3Q15319 338 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 NFE2L2Q16236 605 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 GRIK5Q16478 980 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 PRSS36Q5K4E3 855 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 HP1BP3Q5SSJ5 553 aaPredicted RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 TRAPPC3LQ5T215 181 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 MSL1Q68DK7 614 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 ANKS3Q6ZW76 656 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 REC114Q7Z4M0 266 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 FAM177A1Q8N128 213 aaPredicted RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 ELMO3Q96BJ8 720 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 MRFAP1L1Q96HT8 127 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 CARD10Q9BWT7 1032 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 USP26Q9BXU7 913 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 LRRC3Q9BY71 257 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 BRMS1Q9HCU9 246 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 OSGEPQ9NPF4 335 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 PCDHA4Q9UN74 947 aa4.72□□□□□ -1.65
VCL-203ENST00000461383 TMA7Q9Y2S6 64 aaKnown RBP4.72□□□□□ -1.65
VCL-203ENST00000461383 FAM221AA4D161 298 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 CILPO75339 1184 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 IMPDH2P12268 514 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 MAOBP27338 520 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 CANXP27824 592 aaKnown RBP4.71□□□□□ -1.66
VCL-203ENST00000461383 ETFBP38117 255 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 NLRP12P59046 1061 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 MLECQ14165 292 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 TNNI3KQ59H18 835 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 NBPF6Q5VWK0 638 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 HGSNATQ68CP4 663 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 SCARA3Q6AZY7 606 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 KLHL23Q8NBE8 558 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 GAL3ST3Q96A11 431 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 NBPF4Q96M43 638 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 ZFP64Q9NPA5 681 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 PCDHB14Q9Y5E9 798 aa4.71□□□□□ -1.66
VCL-203ENST00000461383 GRIN3BO60391 1043 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 ZNF252P-AS1Q0IIN9 211 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 LRP8Q14114 963 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 HDXQ7Z353 690 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 PDZD3Q86UT5 571 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 MAP4K3Q8IVH8 894 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 DMRTC2Q8IXT2 367 aaPredicted RBP4.7□□□□□ -1.66
VCL-203ENST00000461383 REXO1Q8N1G1 1221 aaKnown RBP4.7□□□□□ -1.66
VCL-203ENST00000461383 OR6P1Q8NGX9 317 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 GPBAR1Q8TDU6 330 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 DCAF11Q8TEB1 546 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 HNRNPLLQ8WVV9 542 aaKnown RBP4.7□□□□□ -1.66
VCL-203ENST00000461383 PICK1Q9NRD5 415 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 RAD18Q9NS91 495 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 PRKAG3Q9UGI9 489 aa4.7□□□□□ -1.66
VCL-203ENST00000461383 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 CCDC85CA6NKD9 419 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 SMAD7O15105 426 aaKnown RBP4.69□□□□□ -1.66
VCL-203ENST00000461383 PTPN11Q06124 597 aaPredicted RBP4.69□□□□□ -1.66
VCL-203ENST00000461383 PPP2R5EQ16537 467 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 WIPI1Q5MNZ9 446 aaPredicted RBP4.69□□□□□ -1.66
VCL-203ENST00000461383 MPRIPQ6WCQ1 1025 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.69□□□□□ -1.66
VCL-203ENST00000461383 FBXO11Q86XK2 927 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 KLHDC7BQ96G42 594 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 SHDQ96IW2 340 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 SRPK1Q96SB4 655 aaKnown RBP4.69□□□□□ -1.66
VCL-203ENST00000461383 CCDC86Q9H6F5 360 aaKnown RBP4.69□□□□□ -1.66
VCL-203ENST00000461383 KRT82Q9NSB4 513 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 SIRPGQ9P1W8 387 aa4.69□□□□□ -1.66
VCL-203ENST00000461383 SCO2A0A1W2PP80 73 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 PRAMEF27A3QJZ7 478 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms