RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 GPAA1O43292 621 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 MBD4O95243 580 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 NF2P35240 595 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 GRIK5Q16478 980 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 ZNF70Q9UC06 446 aaPredicted RBP13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
SMNDC1-203ENST00000460483 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 PATL2C9JE40 543 aaKnown RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 NT5C2P49902 561 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 TTC6Q86TZ1 520 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 TRIM34Q9BYJ4 488 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 TDRD3Q9H7E2 651 aaKnown RBP13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
SMNDC1-203ENST00000460483 DICER1Q9UPY3 1922 aaKnown RBP13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 TDO2P48775 406 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 ZSCAN29Q8IWY8 852 aaPredicted RBP13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 NAPBQ9H115 298 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 GGA3Q9NZ52 723 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
SMNDC1-203ENST00000460483 CLRN2A0PK11 232 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 SGSM2O43147 1006 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 TOMM70O94826 608 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 MCCP23508 829 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 TGFBRAP1Q8WUH2 860 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 UTRNP46939 3433 aa13.15□□□□□ -0.3
SMNDC1-203ENST00000460483 SBF1O95248 1867 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 A0A0D9SFI3 127 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 RHBDL3P58872 404 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 PICALMQ13492 652 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
SMNDC1-203ENST00000460483 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 CHD4Q14839 1912 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 POTECB2RU33 542 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 RASA3Q14644 834 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 ALX1Q15699 326 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 IMMTQ16891 758 aaKnown RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 ANO2Q9NQ90 1003 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 FLT1P17948 1338 aa13.13□□□□□ -0.31
SMNDC1-203ENST00000460483 M0R2C6 588 aa13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 HSPD1P10809 573 aaKnown RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 FSTL1Q12841 308 aa13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 IFNL3Q8IZI9 196 aa13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 HERC5Q9UII4 1024 aaKnown RBP13.12□□□□□ -0.31
SMNDC1-203ENST00000460483 SCN4AP35499 1836 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms