RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DGKZQ13574 1117 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 SLC9C2Q5TAH2 1124 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 SPTY2D1Q68D10 685 aaPredicted RBP10.66□□□□□ -0.7
VPS50-207ENST00000458530 CIAPIN1Q6FI81 312 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
VPS50-207ENST00000458530 FBXO33Q7Z6M2 555 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 SP8Q8IXZ3 490 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 LARGE2Q8N3Y3 721 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 ZC3H15Q8WU90 426 aaKnown RBP10.66□□□□□ -0.7
VPS50-207ENST00000458530 KCNB2Q92953 911 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 RTFDC1Q9BY42 306 aaPredicted RBP10.66□□□□□ -0.7
VPS50-207ENST00000458530 TM6SF1Q9BZW5 370 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 IL25Q9H293 177 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 PODXL2Q9NZ53 605 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 LRP2BPQ9P2M1 347 aa10.66□□□□□ -0.7
VPS50-207ENST00000458530 FAM155AB1AL88 458 aaPredicted RBP10.65□□□□□ -0.7
VPS50-207ENST00000458530 UFL1O94874 794 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 PDE6AP16499 860 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 GYG1P46976 350 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 HIRAP54198 1017 aaPredicted RBP10.65□□□□□ -0.7
VPS50-207ENST00000458530 PTH1RQ03431 593 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 NOGQ13253 232 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 NECTIN1Q15223 517 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
VPS50-207ENST00000458530 CREB3L3Q68CJ9 461 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
VPS50-207ENST00000458530 FAM84BQ96KN1 310 aaPredicted RBP10.65□□□□□ -0.7
VPS50-207ENST00000458530 PIH1D3Q9NQM4 214 aaKnown RBP10.65□□□□□ -0.7
VPS50-207ENST00000458530 SAGE1Q9NXZ1 904 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 ATP6V0A2Q9Y487 856 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
VPS50-207ENST00000458530 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.71
VPS50-207ENST00000458530 SLC27A2O14975 620 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
VPS50-207ENST00000458530 GNAT2P19087 354 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 NEK4P51957 841 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 CXCL9Q07325 125 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 GRM1Q13255 1194 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 PI16Q6UXB8 463 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 WDR66Q8TBY9 1149 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 GLIS2Q9BZE0 524 aaPredicted RBP10.64□□□□□ -0.71
VPS50-207ENST00000458530 NSFL1CQ9UNZ2 370 aaKnown RBP10.64□□□□□ -0.71
VPS50-207ENST00000458530 CYP46A1Q9Y6A2 500 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 LAMB1P07942 1786 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 MYH2Q9UKX2 1941 aa10.64□□□□□ -0.71
VPS50-207ENST00000458530 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 ZNF532Q9HCE3 1301 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 SNAP23O00161 211 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 SNPHO15079 494 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 GPAA1O43292 621 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 GPSM2P81274 684 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 NIM1KQ8IY84 436 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 EYA3Q99504 573 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 RAI14Q9P0K7 980 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 ZNRF3Q9ULT6 936 aa10.63□□□□□ -0.71
VPS50-207ENST00000458530 COL1A1P02452 1464 aaPredicted RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 SALL1Q9NSC2 1324 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 M0R2C6 588 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 HSPD1P10809 573 aaKnown RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 CASTP20810 708 aaKnown RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 GMPSP49915 693 aaPredicted RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 GSTO1P78417 241 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 AOC3Q16853 763 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 IMMTQ16891 758 aaKnown RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 CDC37L1Q7L3B6 337 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 MAGEB6Q8N7X4 407 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 TBC1D22AQ8WUA7 517 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 OSBP2Q969R2 916 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 JAKMIP1Q96N16 626 aaKnown RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
VPS50-207ENST00000458530 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 ABCF2Q9UG63 623 aa10.62□□□□□ -0.71
VPS50-207ENST00000458530 IRS2Q9Y4H2 1338 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 TCRBV5S4A2TA0A5A2 114 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 PPIP5K2O43314 1243 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 VPS53Q5VIR6 699 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 NAA16Q6N069 864 aaPredicted RBP10.61□□□□□ -0.71
VPS50-207ENST00000458530 DPP8Q6V1X1 898 aaPredicted RBP10.61□□□□□ -0.71
VPS50-207ENST00000458530 RUFY3Q7L099 469 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 MPNDQ8N594 471 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 TRPM4Q8TD43 1214 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 PSME4Q14997 1843 aa10.61□□□□□ -0.71
VPS50-207ENST00000458530 MBD4O95243 580 aa10.6□□□□□ -0.71
VPS50-207ENST00000458530 IL1R1P14778 569 aa10.6□□□□□ -0.71
VPS50-207ENST00000458530 CYP7A1P22680 504 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms