RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SART3Q15020 963 aaKnown RBP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 SLC27A3Q5K4L6 730 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 CCDC181Q5TID7 509 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 LRSAM1Q6UWE0 723 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 ANKRD18AQ8IVF6 992 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 TDRD7Q8NHU6 1098 aaKnown RBP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 TMX1Q9H3N1 280 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 ARAP2Q8WZ64 1704 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 RTL9Q8NET4 1388 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 TTC41PQ6P2S7 1318 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 A0A087WUV0 522 aaPredicted RBP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 SNUPNO95149 360 aaKnown RBP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 SEC24BO95487 1268 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 NTSR2O95665 410 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 PECAM1P16284 738 aaPredicted RBP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 GPTP24298 496 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 KCNQ4P56696 695 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 TBC1D8BQ0IIM8 1120 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 GORABQ5T7V8 394 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 SPRYD3Q8NCJ5 442 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 ATL2Q8NHH9 583 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 KIAA1524Q8TCG1 905 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 CCDC102AQ96A19 550 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 FAM89AQ96GI7 184 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 RBSNQ9H1K0 784 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 ZSCAN16Q9H4T2 348 aaPredicted RBP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 IL1RAPL2Q9NP60 686 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 JADE2Q9NQC1 790 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 NARFQ9UHQ1 456 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 ZNF652Q9Y2D9 606 aa7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.87□□□□□ -1.15
CUBNP3-201ENST00000457461 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 SPEF2Q9C093 1822 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 TESPA1A2RU30 521 aaPredicted RBP7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 CIAO1O76071 339 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 RXRBP28702 533 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 G3BP1Q13283 466 aaKnown RBP eCLIP7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 RBM26Q5T8P6 1007 aaKnown RBP7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 ATG9AQ7Z3C6 839 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 AMIGO3Q86WK7 504 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 GIMAP7Q8NHV1 300 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 KLHDC4Q8TBB5 520 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 GOPCQ9HD26 462 aa7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.86□□□□□ -1.15
CUBNP3-201ENST00000457461 SH3TC1Q8TE82 1336 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 PLSCR1O15162 318 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 GNPATO15228 680 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 PDE8AO60658 829 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 CDC45O75419 566 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 TNNT1P13805 278 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 SDSP20132 328 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 HMGB2P26583 209 aaKnown RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 ELF1P32519 619 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 ACTN2P35609 894 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 NAP1L1P55209 391 aaKnown RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 CTSWP56202 376 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 SF3B2Q13435 895 aaKnown RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 ZSCAN23Q3MJ62 389 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 LONRF3Q496Y0 759 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 SUSD4Q5VX71 490 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 TBC1D9Q6ZT07 1266 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 SYNE4Q8N205 404 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 CLASRPQ8N2M8 674 aaKnown RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 TTLL11Q8NHH1 800 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 TSC1Q92574 1164 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 PLEKHG4BQ96PX9 1271 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 TRIM7Q9C029 511 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 GPR108Q9NPR9 543 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 USP25Q9UHP3 1055 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 TRMT112Q9UI30 125 aaKnown RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 ZNF609O15014 1411 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 RIC1Q4ADV7 1423 aa7.85□□□□□ -1.15
CUBNP3-201ENST00000457461 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 EYA2O00167 538 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 IPO5O00410 1097 aaKnown RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 RTN2O75298 545 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 TRIM37O94972 964 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 IL15P40933 162 aaPredicted RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 TRPC1P48995 793 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 CCDC178Q5BJE1 867 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 NAIF1Q69YI7 327 aaPredicted RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 NOL8Q76FK4 1167 aaKnown RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 ANKRD13BQ86YJ7 626 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 HSCBQ8IWL3 235 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 HS6ST3Q8IZP7 471 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 SMCR8Q8TEV9 937 aaPredicted RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 BHMTQ93088 406 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 TEKT1Q969V4 418 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 EAF2Q96CJ1 260 aaPredicted RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 MAGEC2Q9UBF1 373 aaPredicted RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 EIF3CLB5ME19 914 aaKnown RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 PDLIM1O00151 329 aa7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 TPD52L2O43399 206 aaKnown RBP7.84□□□□□ -1.15
CUBNP3-201ENST00000457461 EPB41L2O43491 1005 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 346.7 ms