RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 PAXBP1Q9Y5B6 917 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 RANBP6O60518 1105 aaKnown RBP14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 WDHD1O75717 1129 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 MBD4O95243 580 aa14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 CCZ1BP86790 482 aa14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 CCZ1P86791 482 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 RBM10P98175 930 aaKnown RBP14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 TMEM67Q5HYA8 995 aa14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 DENND2AQ9ULE3 1009 aa14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 CACNA1SQ13698 1873 aa14.49□□□□□ -0.09
ECHDC1-209ENST00000454591 MROH7-TTC4A0A0A0MT08 1334 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 SPATA31A1Q5TZJ5 1347 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 RIOK3O14730 519 aaKnown RBP14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 CRKLP46109 303 aaKnown RBP14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 NCAPHQ15003 741 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 NYAP1Q6ZVC0 841 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 ZNF710Q8N1W2 664 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 ANKRD7Q92527 254 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 RNF41Q9H4P4 317 aaPredicted RBP14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 ZSWIM5Q9P217 1185 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 TACC3Q9Y6A5 838 aa14.48□□□□□ -0.09
ECHDC1-209ENST00000454591 KIAA1551Q9HCM1 1747 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 APPP05067 770 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 TPM4P67936 248 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 SSRP1Q08945 709 aaKnown RBP14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 TRIM29Q14134 588 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 DPCR1Q3MIW9 517 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 CLEC4GQ6UXB4 293 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 NBPF11Q86T75 865 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 MAGEB6Q8N7X4 407 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 FOXP1Q9H334 677 aaPredicted RBP14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 SLC12A7Q9Y666 1083 aa14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 PDS5AQ29RF7 1337 aaKnown RBP14.47□□□□□ -0.09
ECHDC1-209ENST00000454591 MYH6P13533 1939 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 CCDC69A6NI79 296 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 KIF2AO00139 706 aaPredicted RBP14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 TUBB4AP04350 444 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 PCP11498 1178 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 IGHMBP2P38935 993 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 SYKP43405 635 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 ZRSR1Q15695 479 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 MFSD6Q6ZSS7 791 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 CCDC150Q8NCX0 1101 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 BCL2L12Q9HB09 334 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 SENP2Q9HC62 589 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
ECHDC1-209ENST00000454591 DUOX1Q9NRD9 1551 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 IFIT3O14879 490 aaKnown RBP14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 IGSF3O75054 1194 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 PPFIA3O75145 1194 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 MMP1P03956 469 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 NOSTRINQ8IVI9 506 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 AIFM3Q96NN9 605 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 MAST2Q6P0Q8 1798 aa14.46□□□□□ -0.1
ECHDC1-209ENST00000454591 COL24A1Q17RW2 1714 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 LOC102724428A0A0B4J2F2 783 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 DEXIO95424 95 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 FGRP09769 529 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 TNNT1P13805 278 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 SIK1P57059 783 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 UBE4AQ14139 1066 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 SF3B3Q15393 1217 aaKnown RBP14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 NFXL1Q6ZNB6 911 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 BARGINQ6ZT62 677 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 MICU3Q86XE3 530 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 HELBQ8NG08 1087 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 SMARCC1Q92922 1105 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 CCDC94Q9BW85 323 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 ARMT1Q9H993 441 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 SEC31BQ9NQW1 1179 aa14.45□□□□□ -0.1
ECHDC1-209ENST00000454591 PSDA5PKW4 1024 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 SKILP12757 684 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 PTPREP23469 700 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 CTDSPL2Q05D32 466 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 CHRNDQ07001 517 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 WTAPQ15007 396 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 SEC23AQ15436 765 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 RTN1Q16799 776 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 RILPL1Q5EBL4 403 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 NT5DC1Q5TFE4 455 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 TRIM22Q8IYM9 498 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 LCORLQ8N3X6 602 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 CRACR2BQ8N4Y2 399 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 PHKBQ93100 1093 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 BCL11BQ9C0K0 894 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 HSD3B7Q9H2F3 369 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 ZNF652Q9Y2D9 606 aa14.44□□□□□ -0.1
ECHDC1-209ENST00000454591 SLC4A4Q9Y6R1 1079 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms