RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC00299-204ENST00000454043 FBXO41Q8TF61 875 aa9.46□□□□□ -0.9
LINC00299-204ENST00000454043 NIFKQ9BYG3 293 aaKnown RBP9.46□□□□□ -0.9
LINC00299-204ENST00000454043 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 A0A087WZG4 1122 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 NEURL1BA8MQ27 555 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 ERVV-1B6SEH8 477 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 BACH1O14867 736 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 EIF5BO60841 1220 aaKnown RBP9.45□□□□□ -0.9
LINC00299-204ENST00000454043 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 RGS3P49796 1198 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 GCKRQ14397 625 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 LBRQ14739 615 aaKnown RBP9.45□□□□□ -0.9
LINC00299-204ENST00000454043 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 CCDC191Q8NCU4 936 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 TRERF1Q96PN7 1200 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 ARXQ96QS3 562 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 CFHR5Q9BXR6 569 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 CWC25Q9NXE8 425 aaPredicted RBP9.45□□□□□ -0.9
LINC00299-204ENST00000454043 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
LINC00299-204ENST00000454043 UTYO14607 1347 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
LINC00299-204ENST00000454043 KCNQ2O43526 872 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 RAB11FIP3O75154 756 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
LINC00299-204ENST00000454043 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
LINC00299-204ENST00000454043 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
LINC00299-204ENST00000454043 LYPD4Q6UWN0 246 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 CRISPLD1Q9H336 500 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 RUBCNLQ9H714 662 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 ZNF358Q9NW07 568 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 USP3Q9Y6I4 520 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 TOGARAM1Q9Y4F4 1720 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 LAMB4A4D0S4 1761 aa9.44□□□□□ -0.9
LINC00299-204ENST00000454043 ITGB4P16144 1822 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 USP17L3A6NCW0 530 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 USP17L4A6NCW7 530 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 SRGAP3O43295 1099 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 IGKV5-2P06315 115 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 NBPF7P0C2Y1 421 aaPredicted RBP9.43□□□□□ -0.9
LINC00299-204ENST00000454043 RXRBP28702 533 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 PLA2G4AP47712 749 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 PIP4K2AP48426 406 aaPredicted RBP9.43□□□□□ -0.9
LINC00299-204ENST00000454043 MTX1Q13505 466 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 USP17L2Q6R6M4 530 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 TTLL7Q6ZT98 887 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 USP17L1Q7RTZ2 530 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 ERC1Q8IUD2 1116 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 PGBD3Q8N328 593 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 SSH3Q8TE77 659 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 GLMNQ92990 594 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
LINC00299-204ENST00000454043 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
LINC00299-204ENST00000454043 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
LINC00299-204ENST00000454043 C5P01031 1676 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
LINC00299-204ENST00000454043 EIF5P55010 431 aaKnown RBP9.42□□□□□ -0.9
LINC00299-204ENST00000454043 CLDN10P78369 228 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 PPP1R42Q7Z4L9 355 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 SVOPQ8N4V2 548 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 LRRCC1Q9C099 1032 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
LINC00299-204ENST00000454043 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
LINC00299-204ENST00000454043 GLI3P10071 1580 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 COL15A1P39059 1388 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
LINC00299-204ENST00000454043 CELA2BP08218 269 aaPredicted RBP9.41□□□□□ -0.9
LINC00299-204ENST00000454043 MX2P20592 715 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 ATP1A2P50993 1020 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 INTS5Q6P9B9 1019 aaKnown RBP9.41□□□□□ -0.9
LINC00299-204ENST00000454043 AIDAQ96BJ3 306 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 ISCA1Q9BUE6 129 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 LNPKQ9C0E8 428 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 ZBTB1Q9Y2K1 713 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 KAT6BQ8WYB5 2073 aa9.41□□□□□ -0.9
LINC00299-204ENST00000454043 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.9
LINC00299-204ENST00000454043 CNTNAP4Q9C0A0 1308 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 EPHA4P54764 986 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 FOXK2Q01167 660 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
LINC00299-204ENST00000454043 OS9Q13438 667 aaPredicted RBP9.4□□□□□ -0.9
LINC00299-204ENST00000454043 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 CLEC4GQ6UXB4 293 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 LARGE2Q8N3Y3 721 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 KIF1BPQ96EK5 621 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 NDFIP2Q9NV92 336 aa9.4□□□□□ -0.9
LINC00299-204ENST00000454043 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
LINC00299-204ENST00000454043 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
LINC00299-204ENST00000454043 PCCAP05165 728 aaPredicted RBP9.39□□□□□ -0.91
LINC00299-204ENST00000454043 ATP4AP20648 1035 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms