RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 FUCA2Q9BTY2 467 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
VTA1-203ENST00000452973 LAMB2P55268 1798 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 MSNP26038 577 aaKnown RBP13.71□□□□□ -0.21
VTA1-203ENST00000452973 TYRO3Q06418 890 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
VTA1-203ENST00000452973 RNF41Q9H4P4 317 aaPredicted RBP13.71□□□□□ -0.21
VTA1-203ENST00000452973 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
VTA1-203ENST00000452973 KRT40Q6A162 431 aa13.71□□□□□ -0.22
VTA1-203ENST00000452973 CCDC73Q6ZRK6 1079 aa13.71□□□□□ -0.22
VTA1-203ENST00000452973 A0A087WWV3 80 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 ADCY5O95622 1261 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
VTA1-203ENST00000452973 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 A0A1B0GVL5 298 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 LIFRP42702 1097 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
VTA1-203ENST00000452973 TRIM29Q14134 588 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 ANO6Q4KMQ2 910 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 SASS6Q6UVJ0 657 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 ESR2Q92731 530 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
VTA1-203ENST00000452973 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 MARCKSP29966 332 aaPredicted RBP13.69□□□□□ -0.22
VTA1-203ENST00000452973 GUCY1A2P33402 732 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 KIF23Q02241 960 aaPredicted RBP13.69□□□□□ -0.22
VTA1-203ENST00000452973 GRAPQ13588 217 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
VTA1-203ENST00000452973 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 TNKSO95271 1327 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 SERPINB2P05120 415 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 GYS1P13807 737 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 NTRK3Q16288 839 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 RTN1Q16799 776 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 MRVI1Q9Y6F6 885 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 RGL2O15211 777 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 ONECUT3O60422 494 aaPredicted RBP13.69□□□□□ -0.22
VTA1-203ENST00000452973 CYP2D6P10635 497 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 CTR9Q6PD62 1173 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
VTA1-203ENST00000452973 KINO60870 393 aaKnown RBP13.68□□□□□ -0.22
VTA1-203ENST00000452973 CLCN1P35523 988 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
VTA1-203ENST00000452973 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 ZNF654Q8IZM8 581 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 ZNF830Q96NB3 372 aaPredicted RBP13.68□□□□□ -0.22
VTA1-203ENST00000452973 DNAJC25Q9H1X3 360 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
VTA1-203ENST00000452973 SEMA3EO15041 775 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 SPTLC2O15270 562 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
VTA1-203ENST00000452973 ZNF831Q5JPB2 1677 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 NMT2O60551 498 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 ST5P78524 1137 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 GRIK5Q16478 980 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 BRAPQ7Z569 592 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 BAZ2AQ9UIF9 1905 aaKnown RBP13.67□□□□□ -0.22
VTA1-203ENST00000452973 UFL1O94874 794 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 TRIM22Q8IYM9 498 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 FANCBQ8NB91 859 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 SDF4Q9BRK5 362 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
VTA1-203ENST00000452973 MCM9Q9NXL9 1143 aa13.67□□□□□ -0.22
VTA1-203ENST00000452973 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 AP5Z1O43299 807 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 LDHBP07195 334 aaKnown RBP13.66□□□□□ -0.22
VTA1-203ENST00000452973 GPSM2P81274 684 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 IFIT1BQ5T764 474 aaKnown RBP13.66□□□□□ -0.22
VTA1-203ENST00000452973 ANO1Q5XXA6 986 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 ENAHQ8N8S7 591 aaPredicted RBP13.66□□□□□ -0.22
VTA1-203ENST00000452973 SPC24Q8NBT2 197 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 NDUFA8P51970 172 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 FAM160A1Q05DH4 1040 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
VTA1-203ENST00000452973 FAM200AQ8TCP9 573 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 MRPS27Q92552 414 aaKnown RBP13.66□□□□□ -0.22
VTA1-203ENST00000452973 ZSCAN10Q96SZ4 725 aaPredicted RBP13.66□□□□□ -0.22
VTA1-203ENST00000452973 BRIP1Q9BX63 1249 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 CCDC39Q9UFE4 941 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 XDHP47989 1333 aa13.66□□□□□ -0.22
VTA1-203ENST00000452973 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
VTA1-203ENST00000452973 IQCA1Q86XH1 822 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms