RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ANGEL2Q5VTE6 544 aaKnown RBP4.78□□□□□ -1.64
LRCH3-209ENST00000452660 DTHD1Q6ZMT9 781 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 PLD6Q8N2A8 252 aaKnown RBP4.78□□□□□ -1.64
LRCH3-209ENST00000452660 FLAD1Q8NFF5 587 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 CCER1Q8TC90 406 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-209ENST00000452660 WDR89Q96FK6 387 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-209ENST00000452660 DUSP23Q9BVJ7 150 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 SRCIN1Q9C0H9 1055 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 NLRP2Q9NX02 1062 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 FAM53CQ9NYF3 392 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 GTF3C3Q9Y5Q9 886 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 CARMIL2Q6F5E8 1435 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 DBX1A6NMT0 343 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 NME2P22392 152 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 ARNTP27540 789 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 ZNF252P-AS1Q0IIN9 211 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 CDK5R2Q13319 367 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 TTLL4Q14679 1199 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 ZNF574Q6ZN55 896 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-209ENST00000452660 PI4K2BQ8TCG2 481 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 ASB11Q8WXH4 323 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 NIF3L1Q9GZT8 377 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 C1orf115Q9H7X2 142 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 RC3H2Q9HBD1 1191 aaKnown RBP4.77□□□□□ -1.65
LRCH3-209ENST00000452660 MBNL3Q9NUK0 354 aaKnown RBP4.77□□□□□ -1.65
LRCH3-209ENST00000452660 GTF2IRD1Q9UHL9 959 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 PPM1HQ9ULR3 514 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 SAMM50Q9Y512 469 aa4.77□□□□□ -1.65
LRCH3-209ENST00000452660 RNASE1P07998 156 aaKnown RBP4.76□□□□□ -1.65
LRCH3-209ENST00000452660 AOC3Q16853 763 aa4.76□□□□□ -1.65
LRCH3-209ENST00000452660 SULF2Q8IWU5 870 aa4.76□□□□□ -1.65
LRCH3-209ENST00000452660 KCT2Q8NC54 265 aa4.76□□□□□ -1.65
LRCH3-209ENST00000452660 FBF1Q8TES7 1133 aa4.76□□□□□ -1.65
LRCH3-209ENST00000452660 FAM168AQ92567 244 aa4.76□□□□□ -1.65
LRCH3-209ENST00000452660 LMCD1Q9NZU5 365 aa4.76□□□□□ -1.65
LRCH3-209ENST00000452660 GIPC1O14908 333 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 TRIM37O94972 964 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 NEFMP07197 916 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 CLCN7P51798 805 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 RING1Q06587 406 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 BNIP3Q12983 259 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 PKN1Q16512 942 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 ARHGAP27Q6ZUM4 889 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 FAM214BQ7L5A3 538 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 CEP44Q9C0F1 390 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 GPN3Q9UHW5 284 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-209ENST00000452660 PLAGL2Q9UPG8 496 aa4.75□□□□□ -1.65
LRCH3-209ENST00000452660 FANCGO15287 622 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 RNGTTO60942 597 aaKnown RBP4.74□□□□□ -1.65
LRCH3-209ENST00000452660 FCGRTP55899 365 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 DSC3Q14574 896 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 C22orf34Q6ZV56 151 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.74□□□□□ -1.65
LRCH3-209ENST00000452660 FAM181AQ8N9Y4 354 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 LRRN4CLQ8ND94 238 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 TMC1Q8TDI8 760 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 EPS8L3Q8TE67 593 aaKnown RBP4.74□□□□□ -1.65
LRCH3-209ENST00000452660 ISL2Q96A47 359 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 SLC38A3Q99624 504 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 BCO2Q9BYV7 579 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 ADAMTS6Q9UKP5 1117 aa4.74□□□□□ -1.65
LRCH3-209ENST00000452660 GNEQ9Y223 722 aaKnown RBP4.74□□□□□ -1.65
LRCH3-209ENST00000452660 CARNS1A5YM72 827 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 LEFTY1O75610 366 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 HCLS1P14317 486 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-209ENST00000452660 GSTT1P30711 240 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 LRRC14Q15048 493 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 KCNB2Q92953 911 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 HEXIM2Q96MH2 286 aaKnown RBP4.73□□□□□ -1.65
LRCH3-209ENST00000452660 NECAB3Q96P71 396 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-209ENST00000452660 LGR6Q9HBX8 967 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 DCTN4Q9UJW0 460 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 MAPK8IP1Q9UQF2 711 aa4.73□□□□□ -1.65
LRCH3-209ENST00000452660 SOWAHDA6NJG2 315 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 TREHO43280 583 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 CAP2P40123 477 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 ENOX2Q16206 610 aaKnown RBP4.72□□□□□ -1.65
LRCH3-209ENST00000452660 FBLN7Q53RD9 439 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 ZSWIM9Q86XI8 627 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 KSR1Q8IVT5 923 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 TOP6BLQ8N6T0 577 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 C3orf58Q8NDZ4 430 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 CCDC120Q96HB5 630 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 COX4I2Q96KJ9 171 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 ZC3H12CQ9C0D7 883 aaKnown RBP4.72□□□□□ -1.65
LRCH3-209ENST00000452660 SSU72Q9NP77 194 aaKnown RBP4.72□□□□□ -1.65
LRCH3-209ENST00000452660 PRDM10Q9NQV6 1147 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 CYP8B1Q9UNU6 501 aa4.72□□□□□ -1.65
LRCH3-209ENST00000452660 NTF4P34130 210 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 AFMP43652 599 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 ZNF157P51786 506 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-209ENST00000452660 MESP2Q0VG99 397 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 ZNF648Q5T619 568 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-209ENST00000452660 TMC7Q7Z402 723 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 SPACA3Q8IXA5 215 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 GPBAR1Q8TDU6 330 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 PPP1R16BQ96T49 567 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 U3KQE9 123 aa4.71□□□□□ -1.66
LRCH3-209ENST00000452660 GNAT3A8MTJ3 354 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms