RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RUNDC1Q96C34 613 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 SLC39A13Q96H72 371 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 SEC16BQ96JE7 1060 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 FAM129BQ96TA1 746 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 FEZ1Q99689 392 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 PLVAPQ9BX97 442 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 CHST12Q9NRB3 414 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 TLR7Q9NYK1 1049 aaKnown RBP5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 INTUQ9ULD6 942 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 MRVI1Q9Y6F6 885 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 KRBA1A5PL33 1030 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 SPDYE3A6NKU9 549 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 ZBTB42B2RXF5 422 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 TBX3O15119 743 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 ZRANB2O95218 330 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 PSAPP07602 524 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 HOXD8P13378 290 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 EIF2AK2P19525 551 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 EIF4BP23588 611 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 ETFBP38117 255 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 EIF1AXP47813 144 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 PLAURQ03405 335 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 HLTFQ14527 1009 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 TTF1Q15361 905 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 PERM1Q5SV97 790 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 AXDND1Q5T1B0 1012 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 GPAT2Q6NUI2 795 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 KSR2Q6VAB6 950 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 LILRB2Q8N423 598 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 HNRNPLLQ8WVV9 542 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 NUDT16Q96DE0 195 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 DNAJC7Q99615 494 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 LPIN3Q9BQK8 851 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 PPCSQ9HAB8 311 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 FRRS1LQ9P0K9 344 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 LZTS1Q9Y250 596 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 FNDC3AQ9Y2H6 1198 aaKnown RBP5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 ATP8A1Q9Y2Q0 1164 aa5.56□□□□□ -1.52
HMGB3P21-201ENST00000452483 KLF4O43474 513 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 TIMM44O43615 452 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 FZD6O60353 706 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 RGS9O75916 674 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 IGHA2P01877 340 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 ITGB2P05107 769 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 SPATA31C1P0DKV0 1188 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 TRAPPC10P48553 1259 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 NASPP49321 788 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 AFF1P51825 1210 aaKnown RBP5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 DNM1Q05193 864 aaKnown RBP5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 IFRD2Q12894 506 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 ELMSAN1Q6PJG2 1045 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 SLC4A10Q6U841 1118 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 HFE2Q6ZVN8 426 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 KRT26Q7Z3Y9 468 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 DRC7Q8IY82 874 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 RASGRP4Q8TDF6 673 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 FBF1Q8TES7 1133 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 EDEM1Q92611 657 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 NEUROD6Q96NK8 337 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 ZNF700Q9H0M5 742 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 SPG7Q9UQ90 795 aa5.55□□□□□ -1.52
HMGB3P21-201ENST00000452483 FAM229AH3BQW9 127 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 SCGB1D2O95969 90 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 IGHA1P01876 353 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 PDGFAP04085 211 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 LDHCP07864 332 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 COL6A1P12109 1028 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 KCTD2Q14681 263 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 LRRC41Q15345 812 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 PRRT3Q5FWE3 981 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 PDE12Q6L8Q7 609 aaKnown RBP5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 C14orf80Q86SX3 495 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 MYO1HQ8N1T3 1032 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 OR13H1Q8NG92 308 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 SECISBP2LQ93073 1101 aaKnown RBP5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 TMEM260Q9NX78 707 aa5.54□□□□□ -1.52
HMGB3P21-201ENST00000452483 CCDC163A0A0D9SF12 145 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 ALG1L2C9J202 215 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 PROCP04070 461 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 RPLP1P05386 114 aaKnown RBP5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 PCSK2P16519 638 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 TKFCQ3LXA3 575 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 ZKSCAN2Q63HK3 967 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 ZNF438Q7Z4V0 828 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 CREBRFQ8IUR6 639 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 TEX19Q8NA77 164 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 MYRIPQ8NFW9 859 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 CDC5LQ99459 802 aaKnown RBP5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 SMG9Q9H0W8 520 aaKnown RBP5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 ABI2Q9NYB9 513 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 TMEM63CQ9P1W3 806 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 FRMD4BQ9Y2L6 1034 aa5.53□□□□□ -1.52
HMGB3P21-201ENST00000452483 CLSPNQ9HAW4 1339 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 LOC102724428A0A0B4J2F2 783 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 SHTN1A0MZ66 631 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms