RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 BMP6P22004 513 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 HOXA10P31260 410 aaPredicted RBP7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 TPTE2Q6XPS3 522 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 KCNB2Q92953 911 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 OSBPL1AQ9BXW6 950 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 EMILIN2Q9BXX0 1053 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 DISC1Q9NRI5 854 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 C1GALT1Q9NS00 363 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 LEMD3Q9Y2U8 911 aa7.62□□□□□ -1.19
GTF3C3-207ENST00000451088 DYNC1LI2O43237 492 aaPredicted RBP7.61□□□□□ -1.19
GTF3C3-207ENST00000451088 PAGE1O75459 146 aa7.61□□□□□ -1.19
GTF3C3-207ENST00000451088 ANKRD33BA6NCL7 494 aa7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 FAM170BA6NMN3 283 aa7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 ADAMTS4O75173 837 aa7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 PRPF40AO75400 957 aaKnown RBP7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 MSMPQ1L6U9 139 aa7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 ZC3H12AQ5D1E8 599 aaKnown RBP7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 MAP1SQ66K74 1059 aaPredicted RBP7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 DAGLAQ9Y4D2 1042 aa7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 ARAP1Q96P48 1450 aa7.6□□□□□ -1.19
GTF3C3-207ENST00000451088 USP17L7P0C7H9 530 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 GNA15P30679 374 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 ERVK-24P63145 666 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 CYP27A1Q02318 531 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 SCARA3Q6AZY7 606 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 GPBAR1Q8TDU6 330 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
GTF3C3-207ENST00000451088 FBXO24O75426 580 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 FGD1P98174 961 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 TTLL4Q14679 1199 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 OGFOD3Q6PK18 319 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 MPRIPQ6WCQ1 1025 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 ZNF765Q7L2R6 523 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 SMYD4Q8IYR2 804 aaPredicted RBP7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 PIDD1Q9HB75 910 aa7.58□□□□□ -1.2
GTF3C3-207ENST00000451088 CYP26A1O43174 497 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 TRIM37O94972 964 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 PRNPP04156 253 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 GP2P55259 537 aaKnown RBP7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 EAPPQ56P03 285 aaPredicted RBP7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 DUSP27Q5VZP5 1158 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 CBX8Q9HC52 389 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 CYP8B1Q9UNU6 501 aa7.57□□□□□ -1.2
GTF3C3-207ENST00000451088 CEP164Q9UPV0 1460 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 NEFMP07197 916 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 CELA3AP09093 270 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 EIF4BP23588 611 aaKnown RBP7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 LRRC14Q15048 493 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 SV2BQ7L1I2 683 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 NPAS4Q8IUM7 802 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 LGR6Q9HBX8 967 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 AK5Q9Y6K8 562 aa7.56□□□□□ -1.2
GTF3C3-207ENST00000451088 WNT11O96014 354 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 HCLS1P14317 486 aaPredicted RBP7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 RING1Q06587 406 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 PCNX4Q63HM2 1172 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 LLGL2Q6P1M3 1020 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 DUSP9Q99956 384 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 PCOLCE2Q9UKZ9 415 aa7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 OAS3Q9Y6K5 1087 aaKnown RBP7.55□□□□□ -1.2
GTF3C3-207ENST00000451088 PEG3Q9GZU2 1588 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 NTF4P34130 210 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 CDK5R2Q13319 367 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 ISL2Q96A47 359 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 ACSBG1Q96GR2 724 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 RNF19AQ9NV58 838 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 FANCD2Q9BXW9 1451 aa7.54□□□□□ -1.2
GTF3C3-207ENST00000451088 NFXL1Q6ZNB6 911 aa7.53□□□□□ -1.2
GTF3C3-207ENST00000451088 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
GTF3C3-207ENST00000451088 ZC3H7BQ9UGR2 993 aaKnown RBP7.53□□□□□ -1.2
GTF3C3-207ENST00000451088 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
GTF3C3-207ENST00000451088 CYP27C1Q4G0S4 372 aa7.52□□□□□ -1.21
GTF3C3-207ENST00000451088 FBXO33Q7Z6M2 555 aa7.52□□□□□ -1.21
GTF3C3-207ENST00000451088 BSDC1Q9NW68 430 aaPredicted RBP7.52□□□□□ -1.21
GTF3C3-207ENST00000451088 TTF2Q9UNY4 1162 aaKnown RBP7.52□□□□□ -1.21
GTF3C3-207ENST00000451088 ZNF608Q9ULD9 1512 aaPredicted RBP7.52□□□□□ -1.21
GTF3C3-207ENST00000451088 COL17A1Q9UMD9 1497 aaPredicted RBP7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 DAB2P98082 770 aa7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 PPM1JQ5JR12 505 aa7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 VSIG10LQ86VR7 867 aa7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 LRRC4CQ9HCJ2 640 aa7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 PCDHA4Q9UN74 947 aa7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 URB2Q14146 1524 aaKnown RBP7.51□□□□□ -1.21
GTF3C3-207ENST00000451088 DCDC2CA8MYV0 355 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 FANCGO15287 622 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 MCTP1Q6DN14 999 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 TTBK2Q6IQ55 1244 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 GAL3ST3Q96A11 431 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 DUSP23Q9BVJ7 150 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 PARP2Q9UGN5 583 aa7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 ANGEL1Q9UNK9 670 aaKnown RBP7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 CSADQ9Y600 493 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms