RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 WNK4Q96J92 1243 aa30.4■■■□□ 2.46
UFD1-204ENST00000447868 WRNIP1Q96S55 665 aa30.4■■■□□ 2.46
UFD1-204ENST00000447868 ZNF341Q9BYN7 854 aa30.4■■■□□ 2.46
UFD1-204ENST00000447868 MAP4K4O95819 1239 aaPredicted RBP30.39■■■□□ 2.46
UFD1-204ENST00000447868 VGLL4Q14135 290 aa30.39■■■□□ 2.46
UFD1-204ENST00000447868 SH3BP5LQ7L8J4 393 aa30.39■■■□□ 2.46
UFD1-204ENST00000447868 EDC3Q96F86 508 aaKnown RBP30.39■■■□□ 2.46
UFD1-204ENST00000447868 CSADQ9Y600 493 aa30.39■■■□□ 2.46
UFD1-204ENST00000447868 REM2Q8IYK8 340 aaPredicted RBP30.38■■■□□ 2.45
UFD1-204ENST00000447868 DDTLA6NHG4 134 aaPredicted RBP30.37■■■□□ 2.45
UFD1-204ENST00000447868 CA12O43570 354 aa30.37■■■□□ 2.45
UFD1-204ENST00000447868 PPP4CP60510 307 aa30.37■■■□□ 2.45
UFD1-204ENST00000447868 DYNLL1P63167 89 aaKnown RBP30.37■■■□□ 2.45
UFD1-204ENST00000447868 AAMPQ13685 434 aa30.37■■■□□ 2.45
UFD1-204ENST00000447868 PAG1Q9NWQ8 432 aa30.37■■■□□ 2.45
UFD1-204ENST00000447868 PLCG2P16885 1265 aa30.36■■■□□ 2.45
UFD1-204ENST00000447868 COL13A1Q5TAT6 717 aaPredicted RBP30.36■■■□□ 2.45
UFD1-204ENST00000447868 MIGA1Q8NAN2 632 aa30.36■■■□□ 2.45
UFD1-204ENST00000447868 ZKSCAN4Q969J2 545 aaPredicted RBP30.36■■■□□ 2.45
UFD1-204ENST00000447868 OPTNQ96CV9 577 aa30.36■■■□□ 2.45
UFD1-204ENST00000447868 HAUS7Q99871 368 aa30.36■■■□□ 2.45
UFD1-204ENST00000447868 ZBTB48P10074 688 aaPredicted RBP30.35■■■□□ 2.45
UFD1-204ENST00000447868 GJA5P36382 358 aa30.35■■■□□ 2.45
UFD1-204ENST00000447868 HDAC1Q13547 482 aaPredicted RBP30.35■■■□□ 2.45
UFD1-204ENST00000447868 CNKSR2Q8WXI2 1034 aa30.35■■■□□ 2.45
UFD1-204ENST00000447868 ECHDC1Q9NTX5 307 aa30.35■■■□□ 2.45
UFD1-204ENST00000447868 RNF186Q9NXI6 227 aa30.35■■■□□ 2.45
UFD1-204ENST00000447868 NPM3O75607 178 aaKnown RBP30.34■■■□□ 2.45
UFD1-204ENST00000447868 TRPA1O75762 1119 aa30.34■■■□□ 2.45
UFD1-204ENST00000447868 SLC9C2Q5TAH2 1124 aa30.34■■■□□ 2.45
UFD1-204ENST00000447868 TSHZ3Q63HK5 1081 aa30.34■■■□□ 2.45
UFD1-204ENST00000447868 TGFBRAP1Q8WUH2 860 aa30.34■■■□□ 2.45
UFD1-204ENST00000447868 GPATCH3Q96I76 525 aa30.34■■■□□ 2.45
UFD1-204ENST00000447868 OSBPL5Q9H0X9 879 aaPredicted RBP30.34■■■□□ 2.45
UFD1-204ENST00000447868 CDK5RAP2Q96SN8 1893 aa30.33■■■□□ 2.45
UFD1-204ENST00000447868 INPP5BP32019 993 aa30.33■■■□□ 2.45
UFD1-204ENST00000447868 SREBF2Q12772 1141 aa30.33■■■□□ 2.45
UFD1-204ENST00000447868 SNCAIPQ9Y6H5 919 aa30.33■■■□□ 2.45
UFD1-204ENST00000447868 ATRNL1Q5VV63 1379 aa30.32■■■□□ 2.44
UFD1-204ENST00000447868 SLURP2P0DP57 97 aa30.32■■■□□ 2.44
UFD1-204ENST00000447868 PDE6AP16499 860 aa30.32■■■□□ 2.44
UFD1-204ENST00000447868 TM4SF4P48230 202 aa30.32■■■□□ 2.44
UFD1-204ENST00000447868 IRX6P78412 446 aaPredicted RBP30.32■■■□□ 2.44
UFD1-204ENST00000447868 MAPKAPK5Q8IW41 473 aa30.32■■■□□ 2.44
UFD1-204ENST00000447868 PRDM10Q9NQV6 1147 aa30.32■■■□□ 2.44
UFD1-204ENST00000447868 MANSC4A6NHS7 340 aaPredicted RBP30.31■■■□□ 2.44
UFD1-204ENST00000447868 ANKRD45Q5TZF3 282 aa30.31■■■□□ 2.44
UFD1-204ENST00000447868 GCC1Q96CN9 775 aa30.31■■■□□ 2.44
UFD1-204ENST00000447868 OTUD5Q96G74 571 aa30.31■■■□□ 2.44
UFD1-204ENST00000447868 SAGE1Q9NXZ1 904 aa30.31■■■□□ 2.44
UFD1-204ENST00000447868 ZBTB47Q9UFB7 747 aaPredicted RBP30.31■■■□□ 2.44
UFD1-204ENST00000447868 ZNF112Q9UJU3 913 aa30.31■■■□□ 2.44
UFD1-204ENST00000447868 TMED8Q6PL24 325 aaPredicted RBP30.3■■■□□ 2.44
UFD1-204ENST00000447868 FOCADQ5VW36 1801 aa30.29■■■□□ 2.44
UFD1-204ENST00000447868 ZNF532Q9HCE3 1301 aa30.29■■■□□ 2.44
UFD1-204ENST00000447868 OTUD7AQ8TE49 926 aaPredicted RBP30.29■■■□□ 2.44
UFD1-204ENST00000447868 FLT1P17948 1338 aa30.28■■■□□ 2.44
UFD1-204ENST00000447868 COL2A1P02458 1487 aaPredicted RBP30.28■■■□□ 2.44
UFD1-204ENST00000447868 SPDYE5A6NIY4 337 aa30.28■■■□□ 2.44
UFD1-204ENST00000447868 RWDD1Q9H446 243 aaPredicted RBP30.28■■■□□ 2.44
UFD1-204ENST00000447868 MAGEB6P1A0A0J9YX57 407 aa30.27■■■□□ 2.44
UFD1-204ENST00000447868 ERO1BQ86YB8 467 aa30.27■■■□□ 2.44
UFD1-204ENST00000447868 CERS3Q8IU89 383 aa30.27■■■□□ 2.44
UFD1-204ENST00000447868 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.27■■■□□ 2.449e-9■■■□□ 14.9
UFD1-204ENST00000447868 LAMB1P07942 1786 aa30.26■■■□□ 2.44
UFD1-204ENST00000447868 TCRBV5S4A2TA0A5A2 114 aa30.26■■■□□ 2.43
UFD1-204ENST00000447868 FAM196BA6NMK8 535 aa30.26■■■□□ 2.43
UFD1-204ENST00000447868 PHF20L1A8MW92 1017 aa30.26■■■□□ 2.43
UFD1-204ENST00000447868 USP5P45974 858 aa30.26■■■□□ 2.43
UFD1-204ENST00000447868 MAP3K10Q02779 954 aa30.26■■■□□ 2.43
UFD1-204ENST00000447868 SLFNL1Q499Z3 407 aa30.26■■■□□ 2.43
UFD1-204ENST00000447868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.26■■■□□ 2.43
UFD1-204ENST00000447868 SAP30BPQ9UHR5 308 aaKnown RBP30.26■■■□□ 2.43
UFD1-204ENST00000447868 INHBEP58166 350 aa30.25■■■□□ 2.43
UFD1-204ENST00000447868 RIOK1Q9BRS2 568 aaKnown RBP30.25■■■□□ 2.43
UFD1-204ENST00000447868 MYH7P12883 1935 aa30.24■■■□□ 2.43
UFD1-204ENST00000447868 ADD2P35612 726 aa30.24■■■□□ 2.43
UFD1-204ENST00000447868 NOL9Q5SY16 702 aaKnown RBP30.24■■■□□ 2.43
UFD1-204ENST00000447868 IFNL1Q8IU54 200 aa30.24■■■□□ 2.43
UFD1-204ENST00000447868 DHX36Q9H2U1 1008 aaKnown RBP30.24■■■□□ 2.43
UFD1-204ENST00000447868 PALD1Q9ULE6 856 aa30.24■■■□□ 2.43
UFD1-204ENST00000447868 TTC41PQ6P2S7 1318 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 TBC1D12O60347 775 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 TBC1D8O95759 1140 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 IGHDP01880 384 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 SLC4A8Q2Y0W8 1093 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 MS4A4AQ96JQ5 239 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 CASP8AP2Q9UKL3 1982 aa30.23■■■□□ 2.43
UFD1-204ENST00000447868 IGF2BP3O00425 579 aaKnown RBP eCLIP30.22■■■□□ 2.43
UFD1-204ENST00000447868 IRF6O14896 467 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 CHGBP05060 677 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 MX1P20591 662 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 GTF2A2P52657 109 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 PPIL2Q13356 520 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 SCYL3Q8IZE3 742 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 PI4KBQ9UBF8 816 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 MYH1P12882 1939 aa30.22■■■□□ 2.43
UFD1-204ENST00000447868 CCL15-CCL14A0A0B4J2E2 113 aa30.21■■■□□ 2.43
UFD1-204ENST00000447868 ERC2O15083 957 aa30.21■■■□□ 2.43
UFD1-204ENST00000447868 PPATQ06203 517 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms