RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
COL9A1-205ENST00000447041 ZSCAN29Q8IWY8 852 aaPredicted RBP22.44■■□□□ 1.18
COL9A1-205ENST00000447041 ZCCHC17Q9NP64 241 aaKnown RBP22.44■■□□□ 1.18
COL9A1-205ENST00000447041 KCNH4Q9UQ05 1017 aa22.44■■□□□ 1.18
COL9A1-205ENST00000447041 BRCA2P51587 3418 aa22.43■■□□□ 1.18
COL9A1-205ENST00000447041 DDTLA6NHG4 134 aaPredicted RBP22.43■■□□□ 1.18
COL9A1-205ENST00000447041 TLR2O60603 784 aa22.43■■□□□ 1.18
COL9A1-205ENST00000447041 RHBDL3P58872 404 aa22.43■■□□□ 1.18
COL9A1-205ENST00000447041 SSH3Q8TE77 659 aa22.43■■□□□ 1.18
COL9A1-205ENST00000447041 NSUN4Q96CB9 384 aaKnown RBP22.43■■□□□ 1.18
COL9A1-205ENST00000447041 DOCK1Q14185 1865 aa22.43■■□□□ 1.18
COL9A1-205ENST00000447041 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
COL9A1-205ENST00000447041 GPR75-ASB3A0A0A6YYF3 556 aa22.42■■□□□ 1.18
COL9A1-205ENST00000447041 PHF20L1A8MW92 1017 aa22.42■■□□□ 1.18
COL9A1-205ENST00000447041 ATP8B2P98198 1209 aa22.42■■□□□ 1.18
COL9A1-205ENST00000447041 ARHGAP39Q9C0H5 1083 aa22.42■■□□□ 1.18
COL9A1-205ENST00000447041 RBBP6Q7Z6E9 1792 aaKnown RBP22.42■■□□□ 1.18
COL9A1-205ENST00000447041 OS9Q13438 667 aaPredicted RBP22.41■■□□□ 1.18
COL9A1-205ENST00000447041 MOGSQ13724 837 aa22.41■■□□□ 1.18
COL9A1-205ENST00000447041 TNNI3KQ59H18 835 aa22.41■■□□□ 1.18
COL9A1-205ENST00000447041 SCYL3Q8IZE3 742 aa22.41■■□□□ 1.18
COL9A1-205ENST00000447041 RAI14Q9P0K7 980 aa22.41■■□□□ 1.18
COL9A1-205ENST00000447041 FPGT-TNNI3KV9GXZ4 949 aa22.41■■□□□ 1.18
COL9A1-205ENST00000447041 UQCRFS1P1P0C7P4 283 aa22.4■■□□□ 1.18
COL9A1-205ENST00000447041 ANKRD23Q86SG2 305 aa22.4■■□□□ 1.18
COL9A1-205ENST00000447041 DBNDD2Q9BQY9 259 aa22.4■■□□□ 1.18
COL9A1-205ENST00000447041 PHIPQ8WWQ0 1821 aa22.4■■□□□ 1.18
COL9A1-205ENST00000447041 POTEFA5A3E0 1075 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 PDHXO00330 501 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 ZBTB7BO15156 539 aaPredicted RBP22.39■■□□□ 1.17
COL9A1-205ENST00000447041 SURF6O75683 361 aaKnown RBP22.39■■□□□ 1.17
COL9A1-205ENST00000447041 GSTO1P78417 241 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 LACTBP83111 547 aaPredicted RBP22.39■■□□□ 1.17
COL9A1-205ENST00000447041 ARMC5Q96C12 935 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 GPR108Q9NPR9 543 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 SNRKQ9NRH2 765 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 PTCH2Q9Y6C5 1203 aa22.39■■□□□ 1.17
COL9A1-205ENST00000447041 ADGRA2Q96PE1 1338 aa22.38■■□□□ 1.17
COL9A1-205ENST00000447041 PTPRFP10586 1907 aa22.38■■□□□ 1.17
COL9A1-205ENST00000447041 MAP3K10Q02779 954 aa22.38■■□□□ 1.17
COL9A1-205ENST00000447041 TTC39AQ5SRH9 613 aa22.38■■□□□ 1.17
COL9A1-205ENST00000447041 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.38■■□□□ 1.17
COL9A1-205ENST00000447041 CPA4Q9UI42 421 aa22.38■■□□□ 1.17
COL9A1-205ENST00000447041 MYO5AQ9Y4I1 1855 aaKnown RBP22.38■■□□□ 1.17
COL9A1-205ENST00000447041 ECM2O94769 699 aaPredicted RBP22.37■■□□□ 1.17
COL9A1-205ENST00000447041 LDHCP07864 332 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 PTPRAP18433 802 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 ARHGEF6Q15052 776 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 C17orf99Q6UX52 265 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 PICK1Q9NRD5 415 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 LRP2BPQ9P2M1 347 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 ZHX2Q9Y6X8 837 aa22.37■■□□□ 1.17
COL9A1-205ENST00000447041 FAM196BA6NMK8 535 aa22.36■■□□□ 1.17
COL9A1-205ENST00000447041 TLR7Q9NYK1 1049 aaKnown RBP22.36■■□□□ 1.17
COL9A1-205ENST00000447041 COL2A1P02458 1487 aaPredicted RBP22.35■■□□□ 1.17
COL9A1-205ENST00000447041 CDK5RAP2Q96SN8 1893 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 CXCL11O14625 94 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 NPM3O75607 178 aaKnown RBP22.35■■□□□ 1.17
COL9A1-205ENST00000447041 CTGFP29279 349 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 KIF22Q14807 665 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 CCDC158Q5M9N0 1113 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 GPAT2Q6NUI2 795 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 CCDC84Q86UT8 332 aaPredicted RBP22.35■■□□□ 1.17
COL9A1-205ENST00000447041 PANK1Q8TE04 598 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 OSBPL5Q9H0X9 879 aaPredicted RBP22.35■■□□□ 1.17
COL9A1-205ENST00000447041 DBNLQ9UJU6 430 aaKnown RBP22.35■■□□□ 1.17
COL9A1-205ENST00000447041 NOP58Q9Y2X3 529 aaKnown RBP22.35■■□□□ 1.17
COL9A1-205ENST00000447041 SIPA1L1O43166 1804 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 ATAD5Q96QE3 1844 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 PDE4DIPQ5VU43 2346 aa22.35■■□□□ 1.17
COL9A1-205ENST00000447041 MKI67P46013 3256 aaKnown RBP22.34■■□□□ 1.17
COL9A1-205ENST00000447041 A0A0G2JLL6 359 aaPredicted RBP22.34■■□□□ 1.17
COL9A1-205ENST00000447041 CTNND1O60716 968 aaKnown RBP22.34■■□□□ 1.17
COL9A1-205ENST00000447041 CYP2E1P05181 493 aaPredicted RBP22.34■■□□□ 1.17
COL9A1-205ENST00000447041 SLC9C1Q4G0N8 1177 aa22.34■■□□□ 1.17
COL9A1-205ENST00000447041 CEP85Q6P2H3 762 aa22.34■■□□□ 1.17
COL9A1-205ENST00000447041 PRRT2Q7Z6L0 340 aaPredicted RBP22.34■■□□□ 1.17
COL9A1-205ENST00000447041 TEX11Q8IYF3 940 aa22.34■■□□□ 1.17
COL9A1-205ENST00000447041 SH3RF3Q8TEJ3 882 aaPredicted RBP22.34■■□□□ 1.17
COL9A1-205ENST00000447041 ZNF333Q96JL9 665 aa22.34■■□□□ 1.17
COL9A1-205ENST00000447041 AFG3L2Q9Y4W6 797 aa22.34■■□□□ 1.17
COL9A1-205ENST00000447041 FOCADQ5VW36 1801 aa22.34■■□□□ 1.17
COL9A1-205ENST00000447041 MAP4K4O95819 1239 aaPredicted RBP22.33■■□□□ 1.17
COL9A1-205ENST00000447041 CYP2C8P10632 490 aa22.33■■□□□ 1.17
COL9A1-205ENST00000447041 NAA16Q6N069 864 aaPredicted RBP22.33■■□□□ 1.17
COL9A1-205ENST00000447041 PARK7Q99497 189 aaKnown RBP22.33■■□□□ 1.17
COL9A1-205ENST00000447041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL9A1-205ENST00000447041 AATFQ9NY61 560 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL9A1-205ENST00000447041 TBC1D12O60347 775 aa22.32■■□□□ 1.16
COL9A1-205ENST00000447041 ZAP70P43403 619 aa22.32■■□□□ 1.16
COL9A1-205ENST00000447041 GADL1Q6ZQY3 521 aa22.32■■□□□ 1.16
COL9A1-205ENST00000447041 ADGRA1Q86SQ6 560 aa22.32■■□□□ 1.16
COL9A1-205ENST00000447041 CCDC8Q9H0W5 538 aaPredicted RBP22.32■■□□□ 1.16
COL9A1-205ENST00000447041 TRIM75PA6NK02 468 aa22.31■■□□□ 1.16
COL9A1-205ENST00000447041 PRPF38BQ5VTL8 546 aaKnown RBP22.31■■□□□ 1.16
COL9A1-205ENST00000447041 SH3TC2Q8TF17 1288 aa22.31■■□□□ 1.16
COL9A1-205ENST00000447041 EAF2Q96CJ1 260 aaPredicted RBP22.31■■□□□ 1.16
COL9A1-205ENST00000447041 ZNF512BQ96KM6 892 aaPredicted RBP22.31■■□□□ 1.16
COL9A1-205ENST00000447041 TRIM47Q96LD4 638 aa22.31■■□□□ 1.16
COL9A1-205ENST00000447041 NOL10Q9BSC4 688 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms