RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SPRYD7Q5W111 196 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 ZSCAN29Q8IWY8 852 aaPredicted RBP18.04■□□□□ 0.48
HDAC4-204ENST00000446876 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 WNK4Q96J92 1243 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 WRNIP1Q96S55 665 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 CSRNP1Q96S65 589 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 HAUS7Q99871 368 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 PAG1Q9NWQ8 432 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 SIPA1L1O43166 1804 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 LAMB1P07942 1786 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 BAG3O95817 575 aa18.03■□□□□ 0.48
HDAC4-204ENST00000446876 GJA5P36382 358 aa18.03■□□□□ 0.48
HDAC4-204ENST00000446876 MAP3K9P80192 1104 aa18.03■□□□□ 0.48
HDAC4-204ENST00000446876 TTF1Q15361 905 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-204ENST00000446876 DCAF15Q66K64 600 aa18.03■□□□□ 0.48
HDAC4-204ENST00000446876 BEGAINQ9BUH8 593 aa18.03■□□□□ 0.48
HDAC4-204ENST00000446876 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
HDAC4-204ENST00000446876 HSPA8P11142 646 aaKnown RBP18.02■□□□□ 0.48
HDAC4-204ENST00000446876 PDE6AP16499 860 aa18.02■□□□□ 0.48
HDAC4-204ENST00000446876 PPP4CP60510 307 aa18.02■□□□□ 0.48
HDAC4-204ENST00000446876 SLFNL1Q499Z3 407 aa18.02■□□□□ 0.48
HDAC4-204ENST00000446876 ZKSCAN4Q969J2 545 aaPredicted RBP18.02■□□□□ 0.48
HDAC4-204ENST00000446876 HOOK2Q96ED9 719 aa18.02■□□□□ 0.48
HDAC4-204ENST00000446876 ZNF341Q9BYN7 854 aa18.02■□□□□ 0.48
HDAC4-204ENST00000446876 OSBPL5Q9H0X9 879 aaPredicted RBP18.02■□□□□ 0.48
HDAC4-204ENST00000446876 MYH1P12882 1939 aa18.02■□□□□ 0.47
HDAC4-204ENST00000446876 CHGBP05060 677 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 INPP5BP32019 993 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 CTCFP49711 727 aaPredicted RBP18.01■□□□□ 0.47
HDAC4-204ENST00000446876 LBX1P52954 281 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 AAMPQ13685 434 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 SLC9C2Q5TAH2 1124 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 ANKRD45Q5TZF3 282 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 MAPKAPK5Q8IW41 473 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 TGFBRAP1Q8WUH2 860 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 OPTNQ96CV9 577 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 CSADQ9Y600 493 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 SNCAIPQ9Y6H5 919 aa18.01■□□□□ 0.47
HDAC4-204ENST00000446876 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 UNCXA6NJT0 531 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 FAM196BA6NMK8 535 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 IGSF3O75054 1194 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 MAP4K4O95819 1239 aaPredicted RBP18■□□□□ 0.47
HDAC4-204ENST00000446876 IGHDP01880 384 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 PLCG2P16885 1265 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 GCC1Q96CN9 775 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 GPATCH3Q96I76 525 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 NAV1Q8NEY1 1877 aa18■□□□□ 0.47
HDAC4-204ENST00000446876 COL2A1P02458 1487 aaPredicted RBP18■□□□□ 0.47
HDAC4-204ENST00000446876 FLT1P17948 1338 aa17.99■□□□□ 0.47
HDAC4-204ENST00000446876 DOCK1Q14185 1865 aa17.99■□□□□ 0.47
HDAC4-204ENST00000446876 TCRBV5S4A2TA0A5A2 114 aa17.99■□□□□ 0.47
HDAC4-204ENST00000446876 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
HDAC4-204ENST00000446876 COL13A1Q5TAT6 717 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-204ENST00000446876 OTUD5Q96G74 571 aa17.99■□□□□ 0.47
HDAC4-204ENST00000446876 RNF186Q9NXI6 227 aa17.99■□□□□ 0.47
HDAC4-204ENST00000446876 DDX60LQ5H9U9 1706 aaKnown RBP17.98■□□□□ 0.47
HDAC4-204ENST00000446876 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
HDAC4-204ENST00000446876 TRPA1O75762 1119 aa17.98■□□□□ 0.47
HDAC4-204ENST00000446876 ZBTB48P10074 688 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-204ENST00000446876 SLC4A8Q2Y0W8 1093 aa17.98■□□□□ 0.47
HDAC4-204ENST00000446876 RIOK1Q9BRS2 568 aaKnown RBP17.98■□□□□ 0.47
HDAC4-204ENST00000446876 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-204ENST00000446876 SAP30BPQ9UHR5 308 aaKnown RBP17.98■□□□□ 0.47
HDAC4-204ENST00000446876 ZNF112Q9UJU3 913 aa17.98■□□□□ 0.47
HDAC4-204ENST00000446876 SALL3Q9BXA9 1300 aa17.98■□□□□ 0.47
HDAC4-204ENST00000446876 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
HDAC4-204ENST00000446876 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
HDAC4-204ENST00000446876 MX1P20591 662 aa17.97■□□□□ 0.47
HDAC4-204ENST00000446876 ADD2P35612 726 aa17.97■□□□□ 0.47
HDAC4-204ENST00000446876 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
HDAC4-204ENST00000446876 PI4K2BQ8TCG2 481 aa17.97■□□□□ 0.47
HDAC4-204ENST00000446876 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-204ENST00000446876 MANSC4A6NHS7 340 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-204ENST00000446876 SPDYE5A6NIY4 337 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 PHF20L1A8MW92 1017 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 CA12O43570 354 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 TM4SF4P48230 202 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 SREBF2Q12772 1141 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 SMC5Q8IY18 1101 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 LCORLQ8N3X6 602 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-204ENST00000446876 PALD1Q9ULE6 856 aa17.96■□□□□ 0.47
HDAC4-204ENST00000446876 TTC41PQ6P2S7 1318 aa17.96■□□□□ 0.46
HDAC4-204ENST00000446876 USP5P45974 858 aa17.95■□□□□ 0.46
HDAC4-204ENST00000446876 MAP3K10Q02779 954 aa17.95■□□□□ 0.46
HDAC4-204ENST00000446876 TMED8Q6PL24 325 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-204ENST00000446876 ERO1BQ86YB8 467 aa17.95■□□□□ 0.46
HDAC4-204ENST00000446876 REM2Q8IYK8 340 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-204ENST00000446876 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.95■□□□□ 0.465e-6■■■■■ 34.6
HDAC4-204ENST00000446876 ARMT1Q9H993 441 aa17.95■□□□□ 0.46
HDAC4-204ENST00000446876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.464e-9■■■■■ 42.5
HDAC4-204ENST00000446876 PHIPQ8WWQ0 1821 aa17.95■□□□□ 0.46
HDAC4-204ENST00000446876 BAZ2AQ9UIF9 1905 aaKnown RBP17.94■□□□□ 0.46
HDAC4-204ENST00000446876 IGF2BP3O00425 579 aaKnown RBP eCLIP17.94■□□□□ 0.46
HDAC4-204ENST00000446876 NOL9Q5SY16 702 aaKnown RBP17.94■□□□□ 0.46
HDAC4-204ENST00000446876 PRDM10Q9NQV6 1147 aa17.94■□□□□ 0.46
HDAC4-204ENST00000446876 SAGE1Q9NXZ1 904 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms