RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 PICK1Q9NRD5 415 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 CHST3Q7LGC8 479 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 MCCP23508 829 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 WDR78Q5VTH9 848 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 HHIPL2Q6UWX4 724 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
LIN54-203ENST00000446851 ZNF157P51786 506 aaPredicted RBP12.24□□□□□ -0.45
LIN54-203ENST00000446851 PIBF1Q8WXW3 757 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 ZKSCAN4Q969J2 545 aaPredicted RBP12.24□□□□□ -0.45
LIN54-203ENST00000446851 TCEANC2Q96MN5 208 aa12.24□□□□□ -0.45
LIN54-203ENST00000446851 COL11A2P13942 1736 aaPredicted RBP12.24□□□□□ -0.45
LIN54-203ENST00000446851 CHMLP26374 656 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 STAP2Q9UGK3 403 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 TRIM75PA6NK02 468 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 IMMTQ16891 758 aaKnown RBP12.23□□□□□ -0.45
LIN54-203ENST00000446851 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 NFXL1Q6ZNB6 911 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 ARMC9Q7Z3E5 817 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 PCNTO95613 3336 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 REC8O95072 547 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 RAB11FIP4Q86YS3 637 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 CDCA5Q96FF9 252 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
LIN54-203ENST00000446851 BMP2KLQ5H9B9 411 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 BEGAINQ9BUH8 593 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 SUGT1Q9Y2Z0 365 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 CCDC171Q6TFL3 1326 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 LRRC2Q9BYS8 371 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 GMLQ99445 158 aa12.22□□□□□ -0.45
LIN54-203ENST00000446851 GBA2Q9HCG7 927 aaPredicted RBP12.22□□□□□ -0.45
LIN54-203ENST00000446851 AK9Q5TCS8 1911 aa12.21□□□□□ -0.45
LIN54-203ENST00000446851 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
LIN54-203ENST00000446851 PPFIA3O75145 1194 aa12.21□□□□□ -0.45
LIN54-203ENST00000446851 PDE4BQ07343 736 aa12.21□□□□□ -0.45
LIN54-203ENST00000446851 SERPINB13Q9UIV8 391 aa12.21□□□□□ -0.45
LIN54-203ENST00000446851 CEP350Q5VT06 3117 aa12.21□□□□□ -0.45
LIN54-203ENST00000446851 MYH3P11055 1940 aa12.21□□□□□ -0.45
LIN54-203ENST00000446851 GPR75-ASB3A0A0A6YYF3 556 aa12.21□□□□□ -0.46
LIN54-203ENST00000446851 SMIM22K7EJ46 135 aa12.21□□□□□ -0.46
LIN54-203ENST00000446851 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.46
LIN54-203ENST00000446851 MFSD6Q6ZSS7 791 aa12.21□□□□□ -0.46
LIN54-203ENST00000446851 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.46
LIN54-203ENST00000446851 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.46
LIN54-203ENST00000446851 INPP5BP32019 993 aa12.21□□□□□ -0.46
LIN54-203ENST00000446851 RNF20Q5VTR2 975 aa12.21□□□□□ -0.46
LIN54-203ENST00000446851 FGAP02671 866 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 PLCD1P51178 756 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 CCDC82Q8N4S0 544 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 NUP133Q8WUM0 1156 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 DCP1AQ9NPI6 582 aaPredicted RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 PI4KBQ9UBF8 816 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 CTNNA3Q9UI47 895 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 CHD4Q14839 1912 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 FLT1P17948 1338 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 ERICH2A1L162 156 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 HSPD1P10809 573 aaKnown RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 EVX2Q03828 476 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 CERKLQ49MI3 558 aaPredicted RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 ZMYM1Q5SVZ6 1142 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 ZNF384Q8TF68 577 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 ZHX2Q9Y6X8 837 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 POTECB2RU33 542 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 KIF3CO14782 793 aa12.2□□□□□ -0.46
LIN54-203ENST00000446851 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
LIN54-203ENST00000446851 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
LIN54-203ENST00000446851 GNAT2P19087 354 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.19□□□□□ -0.46
LIN54-203ENST00000446851 ZNF512BQ96KM6 892 aaPredicted RBP12.19□□□□□ -0.46
LIN54-203ENST00000446851 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
LIN54-203ENST00000446851 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 RBM8AQ9Y5S9 174 aaKnown RBP12.19□□□□□ -0.46
LIN54-203ENST00000446851 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 PTH1RQ03431 593 aa12.19□□□□□ -0.46
LIN54-203ENST00000446851 L3MBTL3Q96JM7 780 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms