RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TTC12Q9H892 705 aaPredicted RBP19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 DDX19AQ9NUU7 478 aaKnown RBP19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 PCDHA7Q9UN72 937 aa19.57■□□□□ 0.72
LAPTM4B-201ENST00000445593 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 WTAPQ15007 396 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 CPLX2Q6PUV4 134 aaKnown RBP19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 KCNJ14Q9UNX9 436 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 ERICH2A1L162 156 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 KRT40Q6A162 431 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 UBAC1Q9BSL1 405 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 C17orf53Q8N3J3 647 aaPredicted RBP19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 RCOR1Q9UKL0 485 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 MTMR7Q9Y216 660 aa19.56■□□□□ 0.72
LAPTM4B-201ENST00000445593 RTL9Q8NET4 1388 aa19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 BAZ2BQ9UIF8 2168 aaKnown RBP19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 MECOMQ03112 1051 aa19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 CNBD1Q8NA66 436 aa19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 TMEM87BQ96K49 555 aa19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 ZNF804BA4D1E1 1349 aa19.55■□□□□ 0.72
LAPTM4B-201ENST00000445593 KINO60870 393 aaKnown RBP19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 CYP2D6P10635 497 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 KIF23Q02241 960 aaPredicted RBP19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 FAM217BQ9NTX9 383 aaPredicted RBP19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 USP17L12C9JPN9 530 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 USP17L21D6R901 530 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 ISM2Q6H9L7 571 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 KRT23Q9C075 422 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 TRIM37O94972 964 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 SART3Q15020 963 aaKnown RBP19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 CBX8Q9HC52 389 aa19.54■□□□□ 0.72
LAPTM4B-201ENST00000445593 NMT2O60551 498 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 GNAT2P19087 354 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 ALX1Q15699 326 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 FAM47AQ5JRC9 791 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 PLCD3Q8N3E9 789 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 SDF4Q9BRK5 362 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 CCDC39Q9UFE4 941 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.53■□□□□ 0.729e-8■□□□□ 10.7
LAPTM4B-201ENST00000445593 TRIM29Q14134 588 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 RIOK1Q9BRS2 568 aaKnown RBP19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 TNKSO95271 1327 aa19.53■□□□□ 0.72
LAPTM4B-201ENST00000445593 BIN1O00499 593 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 NDUFA8P51970 172 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 RTN1Q16799 776 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 FAM200AQ8TCP9 573 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 CNNM2Q9H8M5 875 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 DIXDC1Q155Q3 683 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 PNPLA7Q6ZV29 1317 aa19.52■□□□□ 0.72
LAPTM4B-201ENST00000445593 SPTLC2O15270 562 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 CDKL5O76039 1030 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 ZNF165P49910 485 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 SSRP1Q08945 709 aaKnown RBP19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 SPECC1Q5M775 1068 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 SLC10A5Q5PT55 438 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 DZIP1Q86YF9 867 aaKnown RBP19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 LINC00301Q8NCQ3 95 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 STAG1Q8WVM7 1258 aa19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 NOL7Q9UMY1 257 aaKnown RBP19.52■□□□□ 0.71
LAPTM4B-201ENST00000445593 NSUN4Q96CB9 384 aaKnown RBP19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 ZKSCAN5Q9Y2L8 839 aa19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 BTAF1O14981 1849 aa19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 NTRK3Q16288 839 aa19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 C11orf57Q6ZUT1 292 aaPredicted RBP19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 DRC7Q8IY82 874 aa19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 KLHL34Q8N239 644 aa19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
LAPTM4B-201ENST00000445593 TM4SF1P30408 202 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 SNW1Q13573 536 aaKnown RBP19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 GRIK5Q16478 980 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 FBXO33Q7Z6M2 555 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 QTRT2Q9H974 415 aaKnown RBP19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 BTBD18B2RXH4 712 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 MRPS27Q92552 414 aaKnown RBP19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 CLIC6Q96NY7 704 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 UVSSAQ2YD98 709 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 ANO1Q5XXA6 986 aa19.5■□□□□ 0.71
LAPTM4B-201ENST00000445593 SGMS1Q86VZ5 419 aa19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 ESR2Q92731 530 aa19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 RTEL1Q9NZ71 1219 aa19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 FAM160A1Q05DH4 1040 aa19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 RPGRQ92834 1020 aaKnown RBP19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 RNF41Q9H4P4 317 aaPredicted RBP19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 BAZ2AQ9UIF9 1905 aaKnown RBP19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 WDR19Q8NEZ3 1342 aa19.49■□□□□ 0.71
LAPTM4B-201ENST00000445593 NR5A1Q13285 461 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 TRIM5Q9C035 493 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 PRR5LQ6MZQ0 368 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 CTR9Q6PD62 1173 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 ANKRD2Q9GZV1 360 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 SPATA31A6Q5VVP1 1343 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 WDHD1O75717 1129 aaPredicted RBP19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 LIFRP42702 1097 aa19.48■□□□□ 0.71
LAPTM4B-201ENST00000445593 MCM9Q9NXL9 1143 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms