RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 BTBD19C9JJ37 291 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
TREX1-202ENST00000444177 MECOMQ03112 1051 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 PI16Q6UXB8 463 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 EFCC1Q9HA90 598 aa17.18■□□□□ 0.34
TREX1-202ENST00000444177 AK9Q5TCS8 1911 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 GPR75-ASB3A0A0A6YYF3 556 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
TREX1-202ENST00000444177 BTDP43251 543 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 CAP1Q01518 475 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 ZNF384Q8TF68 577 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
TREX1-202ENST00000444177 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
TREX1-202ENST00000444177 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
TREX1-202ENST00000444177 APBB1O00213 710 aa17.16■□□□□ 0.34
TREX1-202ENST00000444177 MCAMP43121 646 aa17.16■□□□□ 0.34
TREX1-202ENST00000444177 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 NOL9Q5SY16 702 aaKnown RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 NSUN4Q96CB9 384 aaKnown RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 DDX4Q9NQI0 724 aaKnown RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
TREX1-202ENST00000444177 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
TREX1-202ENST00000444177 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 TNRC18O15417 2968 aaPredicted RBP17.15■□□□□ 0.34
TREX1-202ENST00000444177 DDTLA6NHG4 134 aaPredicted RBP17.15■□□□□ 0.34
TREX1-202ENST00000444177 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 TLR2O60603 784 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 LDHCP07864 332 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 RHBDL3P58872 404 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 AACSQ86V21 672 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
TREX1-202ENST00000444177 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
TREX1-202ENST00000444177 KIAA0100Q14667 2235 aaKnown RBP17.15■□□□□ 0.34
TREX1-202ENST00000444177 GSTO1P78417 241 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 PICALMQ13492 652 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 ARHGEF6Q15052 776 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 RFX7Q2KHR2 1363 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 ATRNL1Q5VV63 1379 aa17.14■□□□□ 0.33
TREX1-202ENST00000444177 CXCL11O14625 94 aa17.13■□□□□ 0.33
TREX1-202ENST00000444177 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
TREX1-202ENST00000444177 ANKRD23Q86SG2 305 aa17.13■□□□□ 0.33
TREX1-202ENST00000444177 KIF1BPQ96EK5 621 aa17.13■□□□□ 0.33
TREX1-202ENST00000444177 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
TREX1-202ENST00000444177 HTTP42858 3142 aa17.12■□□□□ 0.33
TREX1-202ENST00000444177 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
TREX1-202ENST00000444177 SLURP2P0DP57 97 aa17.12■□□□□ 0.33
TREX1-202ENST00000444177 MOGSQ13724 837 aa17.12■□□□□ 0.33
TREX1-202ENST00000444177 SCYL3Q8IZE3 742 aa17.12■□□□□ 0.33
TREX1-202ENST00000444177 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
TREX1-202ENST00000444177 PDHXO00330 501 aa17.11■□□□□ 0.33
TREX1-202ENST00000444177 C17orf99Q6UX52 265 aa17.11■□□□□ 0.33
TREX1-202ENST00000444177 CLASRPQ8N2M8 674 aaKnown RBP17.11■□□□□ 0.33
TREX1-202ENST00000444177 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
TREX1-202ENST00000444177 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
TREX1-202ENST00000444177 TBC1D12O60347 775 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 CTNND1O60716 968 aaKnown RBP17.1■□□□□ 0.33
TREX1-202ENST00000444177 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 PTPRAP18433 802 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 ZAP70P43403 619 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
TREX1-202ENST00000444177 KIF22Q14807 665 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 ARHGAP39Q9C0H5 1083 aa17.1■□□□□ 0.33
TREX1-202ENST00000444177 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
TREX1-202ENST00000444177 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
TREX1-202ENST00000444177 CPA4Q9UI42 421 aa17.09■□□□□ 0.33
TREX1-202ENST00000444177 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
TREX1-202ENST00000444177 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
TREX1-202ENST00000444177 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
TREX1-202ENST00000444177 FASTKD5Q7L8L6 764 aaKnown RBP17.08■□□□□ 0.32
TREX1-202ENST00000444177 TEX11Q8IYF3 940 aa17.08■□□□□ 0.32
TREX1-202ENST00000444177 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
TREX1-202ENST00000444177 OSBPL5Q9H0X9 879 aaPredicted RBP17.08■□□□□ 0.32
TREX1-202ENST00000444177 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
TREX1-202ENST00000444177 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.32
TREX1-202ENST00000444177 DOCK2Q92608 1830 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 CENPFP49454 3210 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 A0A0G2JLL6 359 aaPredicted RBP17.07■□□□□ 0.32
TREX1-202ENST00000444177 POTEFA5A3E0 1075 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 BAG3O95817 575 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 PPP4CP60510 307 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 PRRT2Q7Z6L0 340 aaPredicted RBP17.07■□□□□ 0.32
TREX1-202ENST00000444177 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms