RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GNRH1P01148 92 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 ARID4AP29374 1257 aaPredicted RBP14.48□□□□□ -0.09
TTC28-203ENST00000442232 TTC39AQ5SRH9 613 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 PRPF38BQ5VTL8 546 aaKnown RBP14.48□□□□□ -0.09
TTC28-203ENST00000442232 PARK7Q99497 189 aaKnown RBP14.48□□□□□ -0.09
TTC28-203ENST00000442232 TMEM106CQ9BVX2 250 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 HMG20BQ9P0W2 317 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 LRP2BPQ9P2M1 347 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 KCNH4Q9UQ05 1017 aa14.48□□□□□ -0.09
TTC28-203ENST00000442232 PDHXO00330 501 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 CXCL11O14625 94 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 LACTBP83111 547 aaPredicted RBP14.47□□□□□ -0.09
TTC28-203ENST00000442232 CCDC158Q5M9N0 1113 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 ZFPM1Q8IX07 1006 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 SCYL3Q8IZE3 742 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 ARMC5Q96C12 935 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 PTCH2Q9Y6C5 1203 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 ZSWIM8A7E2V4 1837 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
TTC28-203ENST00000442232 ATAD5Q96QE3 1844 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 GPR75-ASB3A0A0A6YYF3 556 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 PRMT2P55345 433 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 FASTKD5Q7L8L6 764 aaKnown RBP14.46□□□□□ -0.09
TTC28-203ENST00000442232 MIER1Q8N108 512 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 GPR108Q9NPR9 543 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 ZHX2Q9Y6X8 837 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 PTPRFP10586 1907 aa14.46□□□□□ -0.09
TTC28-203ENST00000442232 KIAA0100Q14667 2235 aaKnown RBP14.46□□□□□ -0.1
TTC28-203ENST00000442232 COL2A1P02458 1487 aaPredicted RBP14.45□□□□□ -0.1
TTC28-203ENST00000442232 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
TTC28-203ENST00000442232 SURF6O75683 361 aaKnown RBP14.45□□□□□ -0.1
TTC28-203ENST00000442232 HOXD10P28358 340 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 MCAMP43121 646 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 TNNI3KQ59H18 835 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 PI16Q6UXB8 463 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 GADL1Q6ZQY3 521 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 TBC1D9Q6ZT07 1266 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 TEX11Q8IYF3 940 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 NSUN4Q96CB9 384 aaKnown RBP14.45□□□□□ -0.1
TTC28-203ENST00000442232 C1orf115Q9H7X2 142 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 DDX4Q9NQI0 724 aaKnown RBP14.45□□□□□ -0.1
TTC28-203ENST00000442232 CPA4Q9UI42 421 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 FPGT-TNNI3KV9GXZ4 949 aa14.45□□□□□ -0.1
TTC28-203ENST00000442232 PHIPQ8WWQ0 1821 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 DDTLA6NHG4 134 aaPredicted RBP14.44□□□□□ -0.1
TTC28-203ENST00000442232 PHF20L1A8MW92 1017 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
TTC28-203ENST00000442232 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
TTC28-203ENST00000442232 FMNL1O95466 1100 aaPredicted RBP14.44□□□□□ -0.1
TTC28-203ENST00000442232 BAG3O95817 575 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 PLCG2P16885 1265 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 ATP8B2P98198 1209 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 POLA2Q14181 598 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 C17orf99Q6UX52 265 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 SH3BP5LQ7L8J4 393 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 SSH3Q8TE77 659 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 ZNF333Q96JL9 665 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.44□□□□□ -0.1
TTC28-203ENST00000442232 MGAMO43451 1857 aa14.44□□□□□ -0.1
TTC28-203ENST00000442232 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 A0A0G2JLL6 359 aaPredicted RBP14.43□□□□□ -0.1
TTC28-203ENST00000442232 POTEFA5A3E0 1075 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 PTPRAP18433 802 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 PSMC4P43686 418 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 RHBDL3P58872 404 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
TTC28-203ENST00000442232 PRRT2Q7Z6L0 340 aaPredicted RBP14.43□□□□□ -0.1
TTC28-203ENST00000442232 RAET1EQ8TD07 263 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 TRIM34Q9BYJ4 488 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
TTC28-203ENST00000442232 OSBPL5Q9H0X9 879 aaPredicted RBP14.43□□□□□ -0.1
TTC28-203ENST00000442232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.43□□□□□ -0.1
TTC28-203ENST00000442232 HTTP42858 3142 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 CDK5RAP2Q96SN8 1893 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 TBC1D12O60347 775 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 MS4A1P11836 297 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 CAP1Q01518 475 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 SMCR8Q8TEV9 937 aaPredicted RBP14.42□□□□□ -0.1
TTC28-203ENST00000442232 DBNDD2Q9BQY9 259 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 SNRKQ9NRH2 765 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 SLC45A1Q9Y2W3 748 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 FOCADQ5VW36 1801 aa14.42□□□□□ -0.1
TTC28-203ENST00000442232 MYO5AQ9Y4I1 1855 aaKnown RBP14.42□□□□□ -0.1
TTC28-203ENST00000442232 TRIM75PA6NK02 468 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 IGSF3O75054 1194 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 SLC34A2O95436 690 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 FCGRTP55899 365 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 MAP3K10Q02779 954 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 MOGSQ13724 837 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 ERC1Q8IUD2 1116 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 SH3TC2Q8TF17 1288 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 ZNF384Q8TF68 577 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 HERC5Q9UII4 1024 aaKnown RBP14.41□□□□□ -0.1
TTC28-203ENST00000442232 PNMA3Q9UL41 463 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 AFG3L2Q9Y4W6 797 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
TTC28-203ENST00000442232 ADGRA2Q96PE1 1338 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms