RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PNOCQ13519 176 aa19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 CLIC6Q96NY7 704 aa19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 MYL10Q9BUA6 226 aa19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 IFIT3O14879 490 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 SERPINC1P01008 464 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 UBASH3AP57075 661 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 SSRP1Q08945 709 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 IFNL3Q8IZI9 196 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 SLC26A6Q9BXS9 759 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 HSD3B7Q9H2F3 369 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 TUBB4AP04350 444 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 MAP3K12Q12852 859 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 CNNM3Q8NE01 707 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 WASF1Q92558 559 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 FAM217BQ9NTX9 383 aaPredicted RBP19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 ZSWIM5Q9P217 1185 aa19.01■□□□□ 0.63
SEMA3B-207ENST00000441915 MROH5Q6ZUA9 1318 aa19■□□□□ 0.63
SEMA3B-207ENST00000441915 STK36Q9NRP7 1315 aa19■□□□□ 0.63
SEMA3B-207ENST00000441915 SPATA5Q8NB90 893 aa19■□□□□ 0.63
SEMA3B-207ENST00000441915 CNNM2Q9H8M5 875 aa19■□□□□ 0.63
SEMA3B-207ENST00000441915 KCNH3Q9ULD8 1083 aa19■□□□□ 0.63
SEMA3B-207ENST00000441915 ZNF397Q8NF99 534 aaPredicted RBP19■□□□□ 0.63
SEMA3B-207ENST00000441915 INCENPQ9NQS7 918 aa19■□□□□ 0.63
SEMA3B-207ENST00000441915 DDX41Q9UJV9 622 aaKnown RBP19■□□□□ 0.63
SEMA3B-207ENST00000441915 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 GTF2E1P29083 439 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 CFAP100Q494V2 611 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 KRBA2Q6ZNG9 492 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 MAGEB6Q8N7X4 407 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 HELBQ8NG08 1087 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 SLAIN2Q9P270 581 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.99■□□□□ 0.637e-13■□□□□ 10.5
SEMA3B-207ENST00000441915 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 V9GYY5 206 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 CCP110O43303 1012 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 SAFBQ15424 915 aaKnown RBP eCLIP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 LONRF3Q496Y0 759 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 KRI1Q8N9T8 703 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 KRT23Q9C075 422 aa18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-207ENST00000441915 MYO1BO43795 1136 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 MBD4O95243 580 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 FMNL1O95466 1100 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 IFNAR1P17181 557 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 FGFR2P21802 821 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 SYT10Q6XYQ8 523 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 HOOK1Q9UJC3 728 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 SLC5A1P13866 664 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 MFSD6Q6ZSS7 791 aa18.98■□□□□ 0.63
SEMA3B-207ENST00000441915 TRIM22Q8IYM9 498 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 L2HGDHQ9H9P8 463 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 ANKRD36CQ5JPF3 1778 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 ERVV-1B6SEH8 477 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 UBE2Q2LH0YL09 131 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 SART3Q15020 963 aaKnown RBP18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 ELF2Q15723 593 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 HOMER1Q86YM7 354 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 ARMT1Q9H993 441 aa18.97■□□□□ 0.63
SEMA3B-207ENST00000441915 RASGRF1Q13972 1273 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 KMT5BQ4FZB7 885 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 DPF2Q92785 391 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 XIRP1Q702N8 1843 aaKnown RBP18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 KAT6BQ8WYB5 2073 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 ECM29Q5VYK3 1845 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 BTBD18B2RXH4 712 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 MMP1P03956 469 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 ELOA2Q8IYF1 753 aaPredicted RBP18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 SLC4A9Q96Q91 983 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 NACAP1Q9BZK3 213 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 TOMM22Q9NS69 142 aa18.96■□□□□ 0.63
SEMA3B-207ENST00000441915 TOP1P11387 765 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 VSTM4Q8IW00 320 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 DIS3L2Q8IYB7 885 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 FANCLQ9NW38 375 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 LRP6O75581 1613 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 ERICH2A1L162 156 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 TDO2P48775 406 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 RRP12Q5JTH9 1297 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 MPHOSPH8Q99549 860 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 MORC2Q9Y6X9 1032 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 ABCA3Q99758 1704 aa18.95■□□□□ 0.62
SEMA3B-207ENST00000441915 GNAT2P19087 354 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 WTAPQ15007 396 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 RTN1Q16799 776 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 AK7Q96M32 723 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 ITGB4P16144 1822 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 NUP98P52948 1817 aa18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-207ENST00000441915 HSPA2P54652 639 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms