RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 VGLL4Q14135 290 aa19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 REM2Q8IYK8 340 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 WNK4Q96J92 1243 aa19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 WRNIP1Q96S55 665 aa19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 ZNF341Q9BYN7 854 aa19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 ELP3Q9H9T3 547 aa19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 ZNF112Q9UJU3 913 aa19.37■□□□□ 0.69
TRAPPC12-209ENST00000441099 CA12O43570 354 aa19.36■□□□□ 0.69
TRAPPC12-209ENST00000441099 PLCG2P16885 1265 aa19.36■□□□□ 0.69
TRAPPC12-209ENST00000441099 MAP3K10Q02779 954 aa19.36■□□□□ 0.69
TRAPPC12-209ENST00000441099 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
TRAPPC12-209ENST00000441099 OSBPL5Q9H0X9 879 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC12-209ENST00000441099 PAG1Q9NWQ8 432 aa19.36■□□□□ 0.69
TRAPPC12-209ENST00000441099 ZBTB48P10074 688 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 PDE6AP16499 860 aa19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 TM4SF4P48230 202 aa19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 SLC9C2Q5TAH2 1124 aa19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 MIGA1Q8NAN2 632 aa19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 ZKSCAN4Q969J2 545 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 CSADQ9Y600 493 aa19.35■□□□□ 0.69
TRAPPC12-209ENST00000441099 TCRBV5S4A2TA0A5A2 114 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 LBX1P52954 281 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 TSHZ3Q63HK5 1081 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 OTUD7AQ8TE49 926 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 TGFBRAP1Q8WUH2 860 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 OPTNQ96CV9 577 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 RNF186Q9NXI6 227 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 SNCAIPQ9Y6H5 919 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 ECM29Q5VYK3 1845 aa19.34■□□□□ 0.69
TRAPPC12-209ENST00000441099 MYH13Q9UKX3 1938 aa19.33■□□□□ 0.69
TRAPPC12-209ENST00000441099 PHF20L1A8MW92 1017 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 IGHDP01880 384 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 SLURP2P0DP57 97 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 INPP5BP32019 993 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 COL13A1Q5TAT6 717 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 ANKRD45Q5TZF3 282 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 CERS3Q8IU89 383 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 GPATCH3Q96I76 525 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 RIOK1Q9BRS2 568 aaKnown RBP19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 PRDM10Q9NQV6 1147 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 SAGE1Q9NXZ1 904 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 TSKSQ9UJT2 592 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 AKAP11Q9UKA4 1901 aa19.33■□□□□ 0.68
TRAPPC12-209ENST00000441099 FLT1P17948 1338 aa19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 SALL3Q9BXA9 1300 aa19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 ZNF532Q9HCE3 1301 aa19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 MANSC4A6NHS7 340 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 SREBF2Q12772 1141 aa19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 MAPKAPK5Q8IW41 473 aa19.32■□□□□ 0.68
TRAPPC12-209ENST00000441099 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 COL2A1P02458 1487 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 TBC1D12O60347 775 aa19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 TRPA1O75762 1119 aa19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 ADD2P35612 726 aa19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 INHBEP58166 350 aa19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 NOL9Q5SY16 702 aaKnown RBP19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 SMC5Q8IY18 1101 aa19.31■□□□□ 0.68
TRAPPC12-209ENST00000441099 TESPA1A2RU30 521 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-209ENST00000441099 SLFNL1Q499Z3 407 aa19.3■□□□□ 0.68
TRAPPC12-209ENST00000441099 ERO1BQ86YB8 467 aa19.3■□□□□ 0.68
TRAPPC12-209ENST00000441099 PI4K2BQ8TCG2 481 aa19.3■□□□□ 0.68
TRAPPC12-209ENST00000441099 MS4A4AQ96JQ5 239 aa19.3■□□□□ 0.68
TRAPPC12-209ENST00000441099 DHX36Q9H2U1 1008 aaKnown RBP19.3■□□□□ 0.68
TRAPPC12-209ENST00000441099 MAGEB6P1A0A0J9YX57 407 aa19.29■□□□□ 0.68
TRAPPC12-209ENST00000441099 CHGBP05060 677 aa19.29■□□□□ 0.68
TRAPPC12-209ENST00000441099 OTUD5Q96G74 571 aa19.29■□□□□ 0.68
TRAPPC12-209ENST00000441099 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.29■□□□□ 0.687e-8■■□□□ 12.3
TRAPPC12-209ENST00000441099 FAM196BA6NMK8 535 aa19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 MX1P20591 662 aa19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 UBE3CQ15386 1083 aa19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 METTL16Q86W50 562 aaKnown RBP19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 PTPN18Q99952 460 aa19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 PI4KBQ9UBF8 816 aa19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 ZBTB47Q9UFB7 747 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC12-209ENST00000441099 IGF2BP3O00425 579 aaKnown RBP eCLIP19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 IRF6O14896 467 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 ERC2O15083 957 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 USP5P45974 858 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 PPATQ06203 517 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 PPIL2Q13356 520 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 IFNL1Q8IU54 200 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 KBTBD3Q8NAB2 608 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 STAP2Q9UGK3 403 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 SAP30BPQ9UHR5 308 aaKnown RBP19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 PALD1Q9ULE6 856 aa19.27■□□□□ 0.68
TRAPPC12-209ENST00000441099 MYH2Q9UKX2 1941 aa19.27■□□□□ 0.67
TRAPPC12-209ENST00000441099 CTNND1O60716 968 aaKnown RBP19.26■□□□□ 0.67
TRAPPC12-209ENST00000441099 GTF2A2P52657 109 aa19.26■□□□□ 0.67
TRAPPC12-209ENST00000441099 SCYL3Q8IZE3 742 aa19.26■□□□□ 0.67
TRAPPC12-209ENST00000441099 LCORLQ8N3X6 602 aa19.26■□□□□ 0.67
TRAPPC12-209ENST00000441099 BRI3BPQ8WY22 251 aa19.26■□□□□ 0.67
TRAPPC12-209ENST00000441099 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms