RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PTCH2Q9Y6C5 1203 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 MYH2Q9UKX2 1941 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 GAKO14976 1311 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 TBC1D12O60347 775 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 FCGRTP55899 365 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 GSE1Q14687 1217 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 ARHGAP45Q92619 1136 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 SPINK5Q9NQ38 1064 aaPredicted RBP7.42□□□□□ -1.22
PTPRR-204ENST00000440835 AK9Q5TCS8 1911 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 RFX7Q2KHR2 1363 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 IRF6O14896 467 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 BCAMP50895 628 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 IRF5Q13568 498 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 ATP2B3Q16720 1220 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 COPRSQ9NQ92 184 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 FZD1Q9UP38 647 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 DAGLAQ9Y4D2 1042 aa7.42□□□□□ -1.22
PTPRR-204ENST00000440835 LOC285556D6RIA3 1793 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 GJB1P08034 283 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 UBTFL1P0CB47 393 aaPredicted RBP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 GSTO1P78417 241 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 SLFN5Q08AF3 891 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 SCYL3Q8IZE3 742 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PICK1Q9NRD5 415 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PTPRFP10586 1907 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PHIPQ8WWQ0 1821 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 ATRNL1Q5VV63 1379 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 A0A0G2JLL6 359 aaPredicted RBP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PDHXO00330 501 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 LDHCP07864 332 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 BCRP11274 1271 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 EN2P19622 333 aaPredicted RBP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PABPC4Q13310 644 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 CDC42EP5Q6NZY7 148 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PPP4R3CPQ6ZMV5 832 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 ATG9AQ7Z3C6 839 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PRRT2Q7Z6L0 340 aaPredicted RBP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 TRMT2AQ8IZ69 625 aaKnown RBP7.41□□□□□ -1.22
PTPRR-204ENST00000440835 PNMA3Q9UL41 463 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
PTPRR-204ENST00000440835 MAST2Q6P0Q8 1798 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 GNAI3P08754 354 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 GRK4P32298 578 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 GJA8P48165 433 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 MTX1Q13505 466 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 MVPQ14764 893 aaKnown RBP7.4□□□□□ -1.22
PTPRR-204ENST00000440835 SSH1Q8WYL5 1049 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 OSBPL5Q9H0X9 879 aaPredicted RBP7.4□□□□□ -1.22
PTPRR-204ENST00000440835 NR2E3Q9Y5X4 410 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 MYPNQ86TC9 1320 aa7.4□□□□□ -1.22
PTPRR-204ENST00000440835 PSMC4P43686 418 aa7.4□□□□□ -1.23
PTPRR-204ENST00000440835 MOGSQ13724 837 aa7.4□□□□□ -1.23
PTPRR-204ENST00000440835 CERS3Q8IU89 383 aa7.4□□□□□ -1.23
PTPRR-204ENST00000440835 ANKLE1Q8NAG6 615 aa7.4□□□□□ -1.23
PTPRR-204ENST00000440835 PROCA1Q8NCQ7 364 aaPredicted RBP7.4□□□□□ -1.23
PTPRR-204ENST00000440835 RAET1EQ8TD07 263 aa7.4□□□□□ -1.23
PTPRR-204ENST00000440835 FRAT1Q92837 279 aaPredicted RBP7.4□□□□□ -1.23
PTPRR-204ENST00000440835 ZKSCAN4Q969J2 545 aaPredicted RBP7.4□□□□□ -1.23
PTPRR-204ENST00000440835 USP40Q9NVE5 1235 aa7.4□□□□□ -1.23
PTPRR-204ENST00000440835 GCLCP48506 637 aaPredicted RBP7.39□□□□□ -1.23
PTPRR-204ENST00000440835 GRIK5Q16478 980 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 UBE2Q1Q7Z7E8 422 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 GTF3C2Q8WUA4 911 aaPredicted RBP7.39□□□□□ -1.23
PTPRR-204ENST00000440835 NAP1L5Q96NT1 182 aaPredicted RBP7.39□□□□□ -1.23
PTPRR-204ENST00000440835 PHF20L1A8MW92 1017 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
PTPRR-204ENST00000440835 OSBPP22059 807 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 GPAT2Q6NUI2 795 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 TRMT44Q8IYL2 757 aaKnown RBP7.39□□□□□ -1.23
PTPRR-204ENST00000440835 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 AFG3L2Q9Y4W6 797 aa7.39□□□□□ -1.23
PTPRR-204ENST00000440835 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
PTPRR-204ENST00000440835 CDAN1Q8IWY9 1227 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.38□□□□□ -1.23
PTPRR-204ENST00000440835 SMC4Q9NTJ3 1288 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 MROH7-TTC4A0A0A0MT08 1334 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 ATAD5Q96QE3 1844 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 GPR75-ASB3A0A0A6YYF3 556 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 IPO8O15397 1037 aaKnown RBP7.38□□□□□ -1.23
PTPRR-204ENST00000440835 CCL5P13501 91 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 PLCG2P16885 1265 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 PTPRAP18433 802 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 INPP5BP32019 993 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 FXR1P51114 621 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPRR-204ENST00000440835 GPR153Q6NV75 609 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 DZIP1Q86YF9 867 aaKnown RBP7.38□□□□□ -1.23
PTPRR-204ENST00000440835 HERC5Q9UII4 1024 aaKnown RBP7.38□□□□□ -1.23
PTPRR-204ENST00000440835 IQSEC3Q9UPP2 1182 aaPredicted RBP7.38□□□□□ -1.23
PTPRR-204ENST00000440835 AGTPBP1Q9UPW5 1226 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 FOCADQ5VW36 1801 aa7.38□□□□□ -1.23
PTPRR-204ENST00000440835 UQCRFS1P1P0C7P4 283 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 COA7Q96BR5 231 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 AS3MTQ9HBK9 375 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 GPR108Q9NPR9 543 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 ZSWIM8A7E2V4 1837 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 RGS3P49796 1198 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 CACNB3P54284 484 aa7.37□□□□□ -1.23
PTPRR-204ENST00000440835 CAP1Q01518 475 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms