RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 AKR1B15C9JRZ8 316 aaPredicted RBP19.29■□□□□ 0.68
PTPRF-209ENST00000438120 POLR2DO15514 142 aaKnown RBP19.29■□□□□ 0.68
PTPRF-209ENST00000438120 EPB41P11171 864 aaKnown RBP19.29■□□□□ 0.68
PTPRF-209ENST00000438120 TBC1D7Q9P0N9 293 aa19.29■□□□□ 0.68
PTPRF-209ENST00000438120 KCNH3Q9ULD8 1083 aa19.29■□□□□ 0.68
PTPRF-209ENST00000438120 ZBTB16Q05516 673 aa19.29■□□□□ 0.68
PTPRF-209ENST00000438120 RAD51AP2Q09MP3 1159 aa19.29■□□□□ 0.68
PTPRF-209ENST00000438120 TBC1D8BQ0IIM8 1120 aa19.29■□□□□ 0.68
PTPRF-209ENST00000438120 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
PTPRF-209ENST00000438120 PROCA1Q8NCQ7 364 aaPredicted RBP19.29■□□□□ 0.68
PTPRF-209ENST00000438120 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 APPBP2Q92624 585 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
PTPRF-209ENST00000438120 TMEM87BQ96K49 555 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 PLCD1P51178 756 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 MAPKAPK5Q8IW41 473 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
PTPRF-209ENST00000438120 CPXCR1Q8N123 301 aa19.28■□□□□ 0.68
PTPRF-209ENST00000438120 IGSF22Q8N9C0 903 aa19.27■□□□□ 0.68
PTPRF-209ENST00000438120 ZAP70P43403 619 aa19.27■□□□□ 0.68
PTPRF-209ENST00000438120 SH2D4AQ9H788 454 aa19.27■□□□□ 0.68
PTPRF-209ENST00000438120 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
PTPRF-209ENST00000438120 MNAT1P51948 309 aa19.27■□□□□ 0.68
PTPRF-209ENST00000438120 DPP8Q6V1X1 898 aaPredicted RBP19.27■□□□□ 0.68
PTPRF-209ENST00000438120 CNGA4Q8IV77 575 aa19.27■□□□□ 0.68
PTPRF-209ENST00000438120 MAK16Q9BXY0 300 aaKnown RBP19.27■□□□□ 0.68
PTPRF-209ENST00000438120 WDR44Q5JSH3 913 aa19.27■□□□□ 0.67
PTPRF-209ENST00000438120 KCNJ14Q9UNX9 436 aa19.27■□□□□ 0.67
PTPRF-209ENST00000438120 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.67
PTPRF-209ENST00000438120 DYMQ7RTS9 669 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 MRRFQ96E11 262 aaKnown RBP19.26■□□□□ 0.67
PTPRF-209ENST00000438120 ARHGEF10LQ9HCE6 1279 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 TMOD4Q9NZQ9 345 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 TXNDC16Q9P2K2 825 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 CAPN2P17655 700 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 CLCN1P35523 988 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 MSANTD4Q8NCY6 345 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 UBLCP1Q8WVY7 318 aaPredicted RBP19.26■□□□□ 0.67
PTPRF-209ENST00000438120 RAB3IL1Q8TBN0 382 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 UAP1Q16222 522 aaPredicted RBP19.26■□□□□ 0.67
PTPRF-209ENST00000438120 LONRF3Q496Y0 759 aa19.26■□□□□ 0.67
PTPRF-209ENST00000438120 TRIM35Q9UPQ4 493 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 RASA3Q14644 834 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 FAM47AQ5JRC9 791 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 SPATA5Q8NB90 893 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 TGFBRAP1Q8WUH2 860 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 STK32BQ9NY57 414 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 TTC38Q5R3I4 469 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 CCDC87Q9NVE4 849 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 FAM169AQ9Y6X4 670 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 PSMC4P43686 418 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 PPARDQ03181 441 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 STAMQ92783 540 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 TNFAIP3P21580 790 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 SEL1L2Q5TEA6 688 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 LARGE2Q8N3Y3 721 aa19.25■□□□□ 0.67
PTPRF-209ENST00000438120 SPOPO43791 374 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 EDC3Q96F86 508 aaKnown RBP19.24■□□□□ 0.67
PTPRF-209ENST00000438120 STMN4Q9H169 189 aaPredicted RBP19.24■□□□□ 0.67
PTPRF-209ENST00000438120 SBNO1A3KN83 1393 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 CSGALNACT2Q8N6G5 542 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 NAP1L4Q99733 375 aaKnown RBP19.24■□□□□ 0.67
PTPRF-209ENST00000438120 RBSNQ9H1K0 784 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 SLC1A4P43007 532 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 AGTPBP1Q9UPW5 1226 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 IGSF3O75054 1194 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 VAV2P52735 878 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 IRX5P78411 483 aaPredicted RBP19.24■□□□□ 0.67
PTPRF-209ENST00000438120 SMTNP53814 917 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 CALCOCO2Q13137 446 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 GCKRQ14397 625 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 MSL1Q68DK7 614 aa19.24■□□□□ 0.67
PTPRF-209ENST00000438120 EIF2AK4Q9P2K8 1649 aaKnown RBP19.24■□□□□ 0.67
PTPRF-209ENST00000438120 LPIN2Q92539 896 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 CNNM4Q6P4Q7 775 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 TNNC1P63316 161 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 JAK2O60674 1132 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
PTPRF-209ENST00000438120 MTRF1LQ9UGC7 380 aaKnown RBP19.23■□□□□ 0.67
PTPRF-209ENST00000438120 MTUS1Q9ULD2 1270 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 SGSM2O43147 1006 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 PPP1R21Q6ZMI0 780 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 SNX29Q8TEQ0 813 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 NOD1Q9Y239 953 aa19.23■□□□□ 0.67
PTPRF-209ENST00000438120 ARHGEF35A5YM69 484 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 CHL1O00533 1208 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 BEND3Q5T5X7 828 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 KBTBD3Q8NAB2 608 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 PER1O15534 1290 aaPredicted RBP19.22■□□□□ 0.67
PTPRF-209ENST00000438120 CPLX4Q7Z7G2 160 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 NSMFQ6X4W1 530 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 SYNRGQ9UMZ2 1314 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 STX10O60499 249 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 HAUS3Q68CZ6 603 aa19.22■□□□□ 0.67
PTPRF-209ENST00000438120 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms