RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 MKRN3Q13064 507 aaKnown RBP19.77■□□□□ 0.76
SMPD4-207ENST00000435455 PICALMQ13492 652 aa19.77■□□□□ 0.76
SMPD4-207ENST00000435455 CERS3Q8IU89 383 aa19.77■□□□□ 0.76
SMPD4-207ENST00000435455 ZFPM1Q8IX07 1006 aa19.77■□□□□ 0.76
SMPD4-207ENST00000435455 WRNIP1Q96S55 665 aa19.77■□□□□ 0.76
SMPD4-207ENST00000435455 DNAJC2Q99543 621 aaKnown RBP19.77■□□□□ 0.76
SMPD4-207ENST00000435455 ANTXR1Q9H6X2 564 aa19.77■□□□□ 0.76
SMPD4-207ENST00000435455 COL2A1P02458 1487 aaPredicted RBP19.76■□□□□ 0.75
SMPD4-207ENST00000435455 MANSC4A6NHS7 340 aaPredicted RBP19.76■□□□□ 0.75
SMPD4-207ENST00000435455 TM4SF4P48230 202 aa19.76■□□□□ 0.75
SMPD4-207ENST00000435455 INHBEP58166 350 aa19.76■□□□□ 0.75
SMPD4-207ENST00000435455 VGLL4Q14135 290 aa19.76■□□□□ 0.75
SMPD4-207ENST00000435455 MIGA2Q7L4E1 593 aa19.76■□□□□ 0.75
SMPD4-207ENST00000435455 SH3RF3Q8TEJ3 882 aaPredicted RBP19.76■□□□□ 0.75
SMPD4-207ENST00000435455 GPATCH3Q96I76 525 aa19.76■□□□□ 0.75
SMPD4-207ENST00000435455 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
SMPD4-207ENST00000435455 AATFQ9NY61 560 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMPD4-207ENST00000435455 CDK5RAP2Q96SN8 1893 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 FOCADQ5VW36 1801 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 GOLIM4O00461 696 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 ADGRA1Q86SQ6 560 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 MAGEB6Q8N7X4 407 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 PAG1Q9NWQ8 432 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 ZNF112Q9UJU3 913 aa19.75■□□□□ 0.75
SMPD4-207ENST00000435455 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
SMPD4-207ENST00000435455 DDTLA6NHG4 134 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-207ENST00000435455 TRPA1O75762 1119 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-207ENST00000435455 COL13A1Q5TAT6 717 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-207ENST00000435455 SH3BP5LQ7L8J4 393 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 HAUS7Q99871 368 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 ECHDC1Q9NTX5 307 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 RNF186Q9NXI6 227 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 TSKSQ9UJT2 592 aa19.74■□□□□ 0.75
SMPD4-207ENST00000435455 GJA5P36382 358 aa19.73■□□□□ 0.75
SMPD4-207ENST00000435455 ERO1BQ86YB8 467 aa19.73■□□□□ 0.75
SMPD4-207ENST00000435455 ZKSCAN4Q969J2 545 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-207ENST00000435455 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-207ENST00000435455 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-207ENST00000435455 SNCAIPQ9Y6H5 919 aa19.73■□□□□ 0.75
SMPD4-207ENST00000435455 MYH7P12883 1935 aa19.72■□□□□ 0.75
SMPD4-207ENST00000435455 SPDYE5A6NIY4 337 aa19.72■□□□□ 0.75
SMPD4-207ENST00000435455 PDE6AP16499 860 aa19.72■□□□□ 0.75
SMPD4-207ENST00000435455 MAP3K10Q02779 954 aa19.72■□□□□ 0.75
SMPD4-207ENST00000435455 SLC9C2Q5TAH2 1124 aa19.72■□□□□ 0.75
SMPD4-207ENST00000435455 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
SMPD4-207ENST00000435455 INPP5BP32019 993 aa19.71■□□□□ 0.75
SMPD4-207ENST00000435455 DYNLL1P63167 89 aaKnown RBP19.71■□□□□ 0.75
SMPD4-207ENST00000435455 NOL9Q5SY16 702 aaKnown RBP19.71■□□□□ 0.75
SMPD4-207ENST00000435455 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
SMPD4-207ENST00000435455 EXOC6Q8TAG9 804 aa19.71■□□□□ 0.75
SMPD4-207ENST00000435455 TGFBRAP1Q8WUH2 860 aa19.71■□□□□ 0.75
SMPD4-207ENST00000435455 DHX36Q9H2U1 1008 aaKnown RBP19.71■□□□□ 0.75
SMPD4-207ENST00000435455 CASP8AP2Q9UKL3 1982 aa19.7■□□□□ 0.74
SMPD4-207ENST00000435455 TBC1D12O60347 775 aa19.7■□□□□ 0.74
SMPD4-207ENST00000435455 ALDH1A1P00352 501 aa19.7■□□□□ 0.74
SMPD4-207ENST00000435455 GTF2A2P52657 109 aa19.7■□□□□ 0.74
SMPD4-207ENST00000435455 EDC3Q96F86 508 aaKnown RBP19.7■□□□□ 0.74
SMPD4-207ENST00000435455 OTUD5Q96G74 571 aa19.7■□□□□ 0.74
SMPD4-207ENST00000435455 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■□ 21.2
SMPD4-207ENST00000435455 FLT1P17948 1338 aa19.7■□□□□ 0.74
SMPD4-207ENST00000435455 MYH1P12882 1939 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 PHF20L1A8MW92 1017 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 PPIL2Q13356 520 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 OTUD7BQ6GQQ9 843 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 MAPKAPK5Q8IW41 473 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
SMPD4-207ENST00000435455 TTC41PQ6P2S7 1318 aa19.69■□□□□ 0.74
SMPD4-207ENST00000435455 MAGEB6P1A0A0J9YX57 407 aa19.68■□□□□ 0.74
SMPD4-207ENST00000435455 PPATQ06203 517 aa19.68■□□□□ 0.74
SMPD4-207ENST00000435455 ZSCAN25Q6NSZ9 544 aa19.68■□□□□ 0.74
SMPD4-207ENST00000435455 IFNL1Q8IU54 200 aa19.68■□□□□ 0.74
SMPD4-207ENST00000435455 TNS4Q8IZW8 715 aa19.68■□□□□ 0.74
SMPD4-207ENST00000435455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.744e-6■■□□□ 13.5
SMPD4-207ENST00000435455 HERC5Q9UII4 1024 aaKnown RBP19.68■□□□□ 0.74
SMPD4-207ENST00000435455 ZNF532Q9HCE3 1301 aa19.68■□□□□ 0.74
SMPD4-207ENST00000435455 DOCK1Q14185 1865 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 TCRBV5S4A2TA0A5A2 114 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
SMPD4-207ENST00000435455 ERC2O15083 957 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 CTNND1O60716 968 aaKnown RBP19.67■□□□□ 0.74
SMPD4-207ENST00000435455 USP5P45974 858 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 ANKRD45Q5TZF3 282 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 MS4A4AQ96JQ5 239 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 RIOK1Q9BRS2 568 aaKnown RBP19.67■□□□□ 0.74
SMPD4-207ENST00000435455 CFHR5Q9BXR6 569 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 PICK1Q9NRD5 415 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 PI4KBQ9UBF8 816 aa19.67■□□□□ 0.74
SMPD4-207ENST00000435455 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMPD4-207ENST00000435455 CETPP11597 493 aa19.66■□□□□ 0.74
SMPD4-207ENST00000435455 ADD2P35612 726 aa19.66■□□□□ 0.74
SMPD4-207ENST00000435455 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
SMPD4-207ENST00000435455 SCYL3Q8IZE3 742 aa19.66■□□□□ 0.74
SMPD4-207ENST00000435455 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
SMPD4-207ENST00000435455 SIPA1L1O43166 1804 aa19.65■□□□□ 0.74
SMPD4-207ENST00000435455 CCL15-CCL14A0A0B4J2E2 113 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms