RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PRKG1Q13976 671 aa22.29■■□□□ 1.16
HLA-F-220ENST00000434407 SLC9C2Q5TAH2 1124 aa22.29■■□□□ 1.16
HLA-F-220ENST00000434407 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
HLA-F-220ENST00000434407 SH3RF3Q8TEJ3 882 aaPredicted RBP22.29■■□□□ 1.16
HLA-F-220ENST00000434407 CCDC102AQ96A19 550 aa22.29■■□□□ 1.16
HLA-F-220ENST00000434407 HOOK2Q96ED9 719 aa22.29■■□□□ 1.16
HLA-F-220ENST00000434407 NOL10Q9BSC4 688 aaKnown RBP22.29■■□□□ 1.16
HLA-F-220ENST00000434407 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
HLA-F-220ENST00000434407 COL2A1P02458 1487 aaPredicted RBP22.28■■□□□ 1.16
HLA-F-220ENST00000434407 ERC2O15083 957 aa22.28■■□□□ 1.16
HLA-F-220ENST00000434407 MAP2K2P36507 400 aa22.28■■□□□ 1.16
HLA-F-220ENST00000434407 IREB2P48200 963 aaKnown RBP22.28■■□□□ 1.16
HLA-F-220ENST00000434407 PAXIP1Q6ZW49 1069 aaPredicted RBP22.28■■□□□ 1.16
HLA-F-220ENST00000434407 SH3BP5LQ7L8J4 393 aa22.28■■□□□ 1.16
HLA-F-220ENST00000434407 TEX11Q8IYF3 940 aa22.28■■□□□ 1.16
HLA-F-220ENST00000434407 ATRNL1Q5VV63 1379 aa22.27■■□□□ 1.16
HLA-F-220ENST00000434407 GLRX3O76003 335 aaKnown RBP22.27■■□□□ 1.16
HLA-F-220ENST00000434407 ADD2P35612 726 aa22.27■■□□□ 1.16
HLA-F-220ENST00000434407 MAP3K10Q02779 954 aa22.27■■□□□ 1.16
HLA-F-220ENST00000434407 RASAL3Q86YV0 1011 aa22.27■■□□□ 1.16
HLA-F-220ENST00000434407 DYNLL1P63167 89 aaKnown RBP22.26■■□□□ 1.15
HLA-F-220ENST00000434407 NOGQ13253 232 aa22.26■■□□□ 1.15
HLA-F-220ENST00000434407 CHD1LQ86WJ1 897 aa22.26■■□□□ 1.15
HLA-F-220ENST00000434407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.26■■□□□ 1.157e-9■■□□□ 12.7
HLA-F-220ENST00000434407 RIOK1Q9BRS2 568 aaKnown RBP22.26■■□□□ 1.15
HLA-F-220ENST00000434407 LNPKQ9C0E8 428 aa22.26■■□□□ 1.15
HLA-F-220ENST00000434407 ZNF532Q9HCE3 1301 aa22.26■■□□□ 1.15
HLA-F-220ENST00000434407 LAMB1P07942 1786 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 DDTLA6NHG4 134 aaPredicted RBP22.25■■□□□ 1.15
HLA-F-220ENST00000434407 AOC2O75106 756 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 PDE1AP54750 535 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 PICALMQ13492 652 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 DCAF15Q66K64 600 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 MIGA1Q8NAN2 632 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.25■■□□□ 1.15
HLA-F-220ENST00000434407 OSBPL5Q9H0X9 879 aaPredicted RBP22.25■■□□□ 1.15
HLA-F-220ENST00000434407 MYH1P12882 1939 aa22.25■■□□□ 1.15
HLA-F-220ENST00000434407 UBE3CQ15386 1083 aa22.24■■□□□ 1.15
HLA-F-220ENST00000434407 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.24■■□□□ 1.15
HLA-F-220ENST00000434407 ANKRD13AQ8IZ07 590 aa22.24■■□□□ 1.15
HLA-F-220ENST00000434407 ZIC5Q96T25 663 aa22.24■■□□□ 1.15
HLA-F-220ENST00000434407 ZNF112Q9UJU3 913 aa22.24■■□□□ 1.15
HLA-F-220ENST00000434407 SIPA1L1O43166 1804 aa22.23■■□□□ 1.15
HLA-F-220ENST00000434407 MAP3K9P80192 1104 aa22.23■■□□□ 1.15
HLA-F-220ENST00000434407 GRM1Q13255 1194 aa22.23■■□□□ 1.15
HLA-F-220ENST00000434407 TGFBRAP1Q8WUH2 860 aa22.23■■□□□ 1.15
HLA-F-220ENST00000434407 CLMNQ96JQ2 1002 aa22.23■■□□□ 1.15
HLA-F-220ENST00000434407 CSRNP1Q96S65 589 aa22.23■■□□□ 1.15
HLA-F-220ENST00000434407 MAGEB6P1A0A0J9YX57 407 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 ZSCAN25Q6NSZ9 544 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 MIGA2Q7L4E1 593 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 SLC10A4Q96EP9 437 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 ZNF341Q9BYN7 854 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 WBP1LQ9NX94 342 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 FLT1P17948 1338 aa22.22■■□□□ 1.15
HLA-F-220ENST00000434407 TBC1D12O60347 775 aa22.21■■□□□ 1.15
HLA-F-220ENST00000434407 CHGBP05060 677 aa22.21■■□□□ 1.15
HLA-F-220ENST00000434407 MAP2K1Q02750 393 aaPredicted RBP22.21■■□□□ 1.15
HLA-F-220ENST00000434407 SLFNL1Q499Z3 407 aa22.21■■□□□ 1.15
HLA-F-220ENST00000434407 PLEKHM2Q8IWE5 1019 aa22.21■■□□□ 1.15
HLA-F-220ENST00000434407 OSBPL3Q9H4L5 887 aa22.21■■□□□ 1.15
HLA-F-220ENST00000434407 VGLL4Q14135 290 aa22.2■■□□□ 1.14
HLA-F-220ENST00000434407 SPRYD7Q5W111 196 aa22.2■■□□□ 1.14
HLA-F-220ENST00000434407 MAPKAPK5Q8IW41 473 aa22.2■■□□□ 1.14
HLA-F-220ENST00000434407 ZSCAN29Q8IWY8 852 aaPredicted RBP22.2■■□□□ 1.14
HLA-F-220ENST00000434407 WRNIP1Q96S55 665 aa22.2■■□□□ 1.14
HLA-F-220ENST00000434407 DHX36Q9H2U1 1008 aaKnown RBP22.2■■□□□ 1.14
HLA-F-220ENST00000434407 DDX60LQ5H9U9 1706 aaKnown RBP22.2■■□□□ 1.14
HLA-F-220ENST00000434407 PHF20L1A8MW92 1017 aa22.19■■□□□ 1.14
HLA-F-220ENST00000434407 KIF23Q02241 960 aaPredicted RBP22.19■■□□□ 1.14
HLA-F-220ENST00000434407 METTL16Q86W50 562 aaKnown RBP22.19■■□□□ 1.14
HLA-F-220ENST00000434407 ZFYP08048 801 aaPredicted RBP22.18■■□□□ 1.14
HLA-F-220ENST00000434407 ZBTB48P10074 688 aaPredicted RBP22.18■■□□□ 1.14
HLA-F-220ENST00000434407 REM2Q8IYK8 340 aaPredicted RBP22.18■■□□□ 1.14
HLA-F-220ENST00000434407 WNK4Q96J92 1243 aa22.18■■□□□ 1.14
HLA-F-220ENST00000434407 SNCAIPQ9Y6H5 919 aa22.18■■□□□ 1.14
HLA-F-220ENST00000434407 NAV1Q8NEY1 1877 aa22.17■■□□□ 1.14
HLA-F-220ENST00000434407 RNF113AO15541 343 aaKnown RBP22.17■■□□□ 1.14
HLA-F-220ENST00000434407 HSPA1AP0DMV8 641 aaKnown RBP22.17■■□□□ 1.14
HLA-F-220ENST00000434407 HSPA1BP0DMV9 641 aaKnown RBP22.17■■□□□ 1.14
HLA-F-220ENST00000434407 INPP5BP32019 993 aa22.17■■□□□ 1.14
HLA-F-220ENST00000434407 GJA5P36382 358 aa22.17■■□□□ 1.14
HLA-F-220ENST00000434407 NOL9Q5SY16 702 aaKnown RBP22.17■■□□□ 1.14
HLA-F-220ENST00000434407 LCORLQ8N3X6 602 aa22.17■■□□□ 1.14
HLA-F-220ENST00000434407 CRNKL1Q9BZJ0 848 aaKnown RBP22.17■■□□□ 1.14
HLA-F-220ENST00000434407 PUS7LQ9H0K6 701 aaKnown RBP22.17■■□□□ 1.14
HLA-F-220ENST00000434407 PI4KBQ9UBF8 816 aa22.17■■□□□ 1.14
HLA-F-220ENST00000434407 CSADQ9Y600 493 aa22.17■■□□□ 1.14
HLA-F-220ENST00000434407 BAZ2AQ9UIF9 1905 aaKnown RBP22.16■■□□□ 1.14
HLA-F-220ENST00000434407 SLURP2P0DP57 97 aa22.16■■□□□ 1.14
HLA-F-220ENST00000434407 USP5P45974 858 aa22.16■■□□□ 1.14
HLA-F-220ENST00000434407 LRRFIP1Q32MZ4 808 aaKnown RBP22.16■■□□□ 1.14
HLA-F-220ENST00000434407 TICAM2Q86XR7 235 aa22.16■■□□□ 1.14
HLA-F-220ENST00000434407 APPBP2Q92624 585 aa22.16■■□□□ 1.14
HLA-F-220ENST00000434407 ZKSCAN4Q969J2 545 aaPredicted RBP22.16■■□□□ 1.14
HLA-F-220ENST00000434407 ELP3Q9H9T3 547 aa22.16■■□□□ 1.14
HLA-F-220ENST00000434407 PALD1Q9ULE6 856 aa22.16■■□□□ 1.14
HLA-F-220ENST00000434407 MBD4O95243 580 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms