RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 TEX2Q8IWB9 1127 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 CCDC110Q8TBZ0 833 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 TRIM31Q9BZY9 425 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 CTNND2Q9UQB3 1225 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 ERCC3P19447 782 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 MFSD6Q6ZSS7 791 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 CROCCP2Q86T23 111 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 TBC1D5Q92609 795 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 NOX5Q96PH1 765 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 WWC3Q9ULE0 1092 aa11.67□□□□□ -0.54
PKNOX1-203ENST00000432907 SYNRGQ9UMZ2 1314 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 TXNDC9O14530 226 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 ACTN4O43707 911 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 TTC6Q86TZ1 520 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 VPS52Q8N1B4 723 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 IQUBQ8NA54 791 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 SGSM2O43147 1006 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 CTNNA1P35221 906 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 RTN1Q16799 776 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 KCTD16Q68DU8 428 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 SAAL1Q96ER3 474 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 CNPY4Q8N129 248 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 ARHGAP24Q8N264 748 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 GBP7Q8N8V2 638 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 RAB3IPQ96QF0 476 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 RASSF2P50749 326 aa11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-203ENST00000432907 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 ARHGEF5Q12774 1597 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 WTAPQ15007 396 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 NME9Q86XW9 330 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 LLPHQ9BRT6 129 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 SOS1Q07889 1333 aaPredicted RBP11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 TNRQ92752 1358 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 CASQ2O14958 399 aaPredicted RBP11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 NSFL1CQ9UNZ2 370 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 FERP16591 822 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 CABP4P57796 275 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 WWC2Q6AWC2 1192 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 TRMT44Q8IYL2 757 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 CXorf56Q9H5V9 222 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 SUFUQ9UMX1 484 aa11.65□□□□□ -0.54
PKNOX1-203ENST00000432907 PHLDB3Q6NSJ2 640 aa11.65□□□□□ -0.55
PKNOX1-203ENST00000432907 USH1CQ9Y6N9 552 aa11.65□□□□□ -0.55
PKNOX1-203ENST00000432907 GUCY2CP25092 1073 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 CCDC51Q96ER9 411 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 ZCCHC17Q9NP64 241 aaKnown RBP11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 MYO5CQ9NQX4 1742 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 MTUS1Q9ULD2 1270 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■■■■□ 21.7
PKNOX1-203ENST00000432907 TMEM110-MUSTN1A8MSY1 372 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 SLC27A2O14975 620 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 STX10O60499 249 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 CCDC62Q6P9F0 684 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 MAGEA1P43355 309 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 COG7P83436 770 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 POLR2DO15514 142 aaKnown RBP11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 POLE2P56282 527 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 CASP8Q14790 479 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 AEBP2Q6ZN18 517 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 VCX3AQ9NNX9 186 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 PLCB1Q9NQ66 1216 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 TAB2Q9NYJ8 693 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 KLHL14Q9P2G3 628 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 MRFAP1Q9Y605 127 aa11.64□□□□□ -0.55
PKNOX1-203ENST00000432907 TRIM66O15016 1216 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 CEP104O60308 925 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 JAK2O60674 1132 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 SESN3P58005 492 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 SRLQ86TD4 932 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 OPHN1O60890 802 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 CYP2C19P33261 490 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 APBA1Q02410 837 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 HINFPQ9BQA5 517 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 RABGAP1Q9Y3P9 1069 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 FAM169AQ9Y6X4 670 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 TSKSQ9UJT2 592 aa11.63□□□□□ -0.55
PKNOX1-203ENST00000432907 NOS1P29475 1434 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms