RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 USP26Q9BXU7 913 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 CALCOCO1Q9P1Z2 691 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 CNPY2Q9Y2B0 182 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 BBOX1O75936 387 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 SEC24BO95487 1268 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 DYNLL1P63167 89 aaKnown RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 TRAF1Q13077 416 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 ERMNQ8TAM6 284 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 FAM212AQ96EL1 285 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 ZNF277Q9NRM2 450 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 NARFQ9UHQ1 456 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 A0A0G2JLW4 131 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 ZSCAN30Q86W11 494 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 CMTR1Q8N1G2 835 aaKnown RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 IVNS1ABPQ9Y6Y0 642 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 B4DLN1 442 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 M0R2C6 588 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 ATP5JP18859 108 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 SLC1A4P43007 532 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 CERKLQ49MI3 558 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 RUFY1Q96T51 708 aa8.11□□□□□ -1.11
ATXN3-204ENST00000429774 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 CIZ1Q9ULV3 898 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-204ENST00000429774 CARMIL3Q8ND23 1372 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 TBCAO75347 108 aaKnown RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 TNFAIP1Q13829 316 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 EAF2Q96CJ1 260 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 EXOC1Q9NV70 894 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 ABT1Q9ULW3 272 aaKnown RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 USP17L12C9JPN9 530 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 USP17L21D6R901 530 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 GTF2A1P52655 376 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 MIGA2Q7L4E1 593 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 MARCH10Q8NA82 808 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 AS3MTQ9HBK9 375 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 USP17L3A6NCW0 530 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 USP17L4A6NCW7 530 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 ZNF174Q15697 407 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 C8orf34Q49A92 452 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 USP17L1Q7RTZ2 530 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
ATXN3-204ENST00000429774 SNX14Q9Y5W7 946 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 NRXN1Q9ULB1 1477 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 RAD50Q92878 1312 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 BACH1O14867 736 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 MCM4P33991 863 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 LETM2Q2VYF4 491 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 CFAP100Q494V2 611 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 CERS3Q8IU89 383 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 DRC1Q96MC2 740 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 AKNAD1Q5T1N1 836 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 HAUS7Q99871 368 aa8.1□□□□□ -1.11
ATXN3-204ENST00000429774 CALML3P27482 149 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 CCDC183Q5T5S1 534 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 ARPP21Q9UBL0 812 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-204ENST00000429774 V9GY48 417 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-204ENST00000429774 ZNF397Q8NF99 534 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-204ENST00000429774 PHKBQ93100 1093 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 ZSCAN16Q9H4T2 348 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-204ENST00000429774 CIAO1O76071 339 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 ANAPC15P60006 121 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 IFNL3Q8IZI9 196 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 SSH3Q8TE77 659 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 GNA11P29992 359 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 TTC16Q8NEE8 873 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 RNF181Q9P0P0 153 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 USP31Q70CQ4 1352 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 UBE4AQ14139 1066 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 FKBP15Q5T1M5 1219 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 JAKMIP3Q5VZ66 844 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 DHX58Q96C10 678 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 PUF60Q9UHX1 559 aaKnown RBP8.09□□□□□ -1.11
ATXN3-204ENST00000429774 PALD1Q9ULE6 856 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 MED14O60244 1454 aa8.09□□□□□ -1.11
ATXN3-204ENST00000429774 AOX1Q06278 1338 aa8.09□□□□□ -1.12
ATXN3-204ENST00000429774 A0A0D9SFI3 127 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 E7EWF7 191 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 PDE6AP16499 860 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 PIK3AP1Q6ZUJ8 805 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 CSRNP1Q96S65 589 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 IBTKQ9P2D0 1353 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-204ENST00000429774 ECE2O60344 883 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 CIAPIN1Q6FI81 312 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 BARGINQ6ZT62 677 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 CFBP00751 764 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 ZNF853P0CG23 659 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 CNGA1P29973 690 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 USP8P40818 1118 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 CCDC40Q4G0X9 1142 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-204ENST00000429774 CACNA2D4Q7Z3S7 1137 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 NCAPG2Q86XI2 1143 aa8.08□□□□□ -1.12
ATXN3-204ENST00000429774 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms