RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SFSWAPQ12872 951 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 HDGFL1Q5TGJ6 251 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 CYB5D1Q6P9G0 228 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 RUFY3Q7L099 469 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 KIRREL3Q8IZU9 778 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 NUP133Q8WUM0 1156 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 RMI1Q9H9A7 625 aa10.06□□□□□ -0.8
CDC42BPA-206ENST00000429440 VPS37CA5D8V6 355 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 OATP04181 439 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 LTKP29376 864 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 AK2P54819 239 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 MTHFD1LQ6UB35 978 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 DDX46Q7L014 1031 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 BZW1Q7L1Q6 419 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 ARHGAP22Q7Z5H3 698 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 FUKQ8N0W3 1084 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 SPAG5Q96R06 1193 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 TPCN1Q9ULQ1 816 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 PTPRUQ92729 1446 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 NALCNQ8IZF0 1738 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 GOLGA6CA6NDK9 693 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 NDUFAB1O14561 156 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 HMOX1P09601 288 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 GOLGA6DP0CG33 693 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 TPP2P29144 1249 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 PDE1AP54750 535 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 SKOR1P84550 965 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 HSP90AB4PQ58FF6 505 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 AOPEPQ8N6M6 819 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 ATL2Q8NHH9 583 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 EBF2Q9HAK2 575 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 GOLGA6AQ9NYA3 693 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 IFNKQ9P0W0 207 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 TPX2Q9ULW0 747 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 NUB1Q9Y5A7 615 aa10.05□□□□□ -0.8
CDC42BPA-206ENST00000429440 IFIT2P09913 472 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 CDC37Q16543 378 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 TRIM42Q8IWZ5 723 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 PGBD1Q96JS3 809 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 CENPHQ9H3R5 247 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 PAPOLBQ9NRJ5 636 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 PLEKHG1Q9ULL1 1385 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 BIN1O00499 593 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 ZNF202O95125 648 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 POLD1P28340 1107 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 RANBP1P43487 201 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 GNGT1P63211 74 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 NFE2L2Q16236 605 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 DBN1Q16643 649 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 APLFQ8IW19 511 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 MIPOL1Q8TD10 442 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 COG1Q8WTW3 980 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 LRRCC1Q9C099 1032 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 SUN2Q9UH99 717 aa10.04□□□□□ -0.8
CDC42BPA-206ENST00000429440 RPSAP08865 295 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 PDHBP11177 359 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 STIM1Q13586 685 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 CRELD2Q6UXH1 353 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC12Q8WUD4 166 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 DTNBP1Q96EV8 351 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 API5Q9BZZ5 524 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 SAMM50Q9Y512 469 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 OVOS2A0A0J9YW53 1432 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 OVOS2Q6IE36 1432 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 ATP10DQ9P241 1426 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 RGPD1P0DJD0 1748 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 GOLGA6L10A6NI86 522 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 MGRN1O60291 552 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 MYL1P05976 194 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 RRP12Q5JTH9 1297 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 LARP1BQ659C4 914 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 GALNT15Q8N3T1 639 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 RBM17Q96I25 401 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 RTEL1Q9NZ71 1219 aa10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-206ENST00000429440 SRRM3A6NNA2 597 aaPredicted RBP10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 PPP1R12BO60237 982 aaPredicted RBP10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 STX10O60499 249 aa10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 RNF8O76064 485 aa10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 SASH1O94885 1247 aa10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC38Q502W7 563 aa10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 LRRC23Q53EV4 343 aaPredicted RBP10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms