RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 CD209Q9NNX6 404 aa12.81□□□□□ -0.36
HIPK2-203ENST00000428878 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
HIPK2-203ENST00000428878 CTDP1Q9Y5B0 961 aaPredicted RBP12.81□□□□□ -0.36
HIPK2-203ENST00000428878 LRP6O75581 1613 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 NLRP5P59047 1200 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 UTRNP46939 3433 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
HIPK2-203ENST00000428878 GRM1Q13255 1194 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 GRIK5Q16478 980 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 LRRC47Q8N1G4 583 aaKnown RBP12.8□□□□□ -0.36
HIPK2-203ENST00000428878 PLIN2Q99541 437 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 DSCC1Q9BVC3 393 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
HIPK2-203ENST00000428878 ALDH1B1P30837 517 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 KDM3BQ7LBC6 1761 aa12.8□□□□□ -0.36
HIPK2-203ENST00000428878 CYB5R4Q7L1T6 521 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 PROM2Q8N271 834 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 NEDD4P46934 1319 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
HIPK2-203ENST00000428878 KRT23Q9C075 422 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 VPS54Q9P1Q0 977 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 XBP1P17861 261 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
HIPK2-203ENST00000428878 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 ARID3AQ99856 593 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 UBA5Q9GZZ9 404 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
HIPK2-203ENST00000428878 TNKSO95271 1327 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
HIPK2-203ENST00000428878 SASS6Q6UVJ0 657 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 SPICE1Q8N0Z3 855 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 FEZ1Q99689 392 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 POLLQ9UGP5 575 aa12.79□□□□□ -0.36
HIPK2-203ENST00000428878 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
HIPK2-203ENST00000428878 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
HIPK2-203ENST00000428878 PLA2G12BQ9BX93 195 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 SSBP05455 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
HIPK2-203ENST00000428878 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
HIPK2-203ENST00000428878 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
HIPK2-203ENST00000428878 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 GDF11O95390 407 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 ATP2B4P23634 1241 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 EYA3Q99504 573 aa12.78□□□□□ -0.36
HIPK2-203ENST00000428878 GSTO1P78417 241 aa12.77□□□□□ -0.36
HIPK2-203ENST00000428878 FSIP1Q8NA03 581 aa12.77□□□□□ -0.36
HIPK2-203ENST00000428878 TBC1D16Q8TBP0 767 aa12.77□□□□□ -0.36
HIPK2-203ENST00000428878 GSG1L2A8MUP6 293 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 BBOX1O75936 387 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 CDKL5O76039 1030 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 PRAMEF18Q5VWM3 479 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 GPKOWQ92917 476 aaPredicted RBP eCLIP12.77□□□□□ -0.372e-8■■■■■ 52.2
HIPK2-203ENST00000428878 DACT1Q9NYF0 836 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 TDRD3Q9H7E2 651 aaKnown RBP12.77□□□□□ -0.37
HIPK2-203ENST00000428878 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
HIPK2-203ENST00000428878 A0A1B0GVL5 298 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 HLA-DOAP06340 250 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
HIPK2-203ENST00000428878 ZHX3Q9H4I2 956 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 CLIP2Q9UDT6 1046 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 SNAP25P60880 206 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
HIPK2-203ENST00000428878 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 GRPEL1Q9HAV7 217 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 EPB41L4AQ9HCS5 686 aaPredicted RBP12.76□□□□□ -0.37
HIPK2-203ENST00000428878 PCDHAC2Q9Y5I4 1007 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 GOLGA6L19H0YKK7 550 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 GNAT2P19087 354 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
HIPK2-203ENST00000428878 CABP5Q9NP86 173 aa12.76□□□□□ -0.37
HIPK2-203ENST00000428878 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 KLHL10Q6JEL2 608 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 PKD1L3Q7Z443 1732 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
HIPK2-203ENST00000428878 SLF2Q8IX21 1173 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
HIPK2-203ENST00000428878 STAMQ92783 540 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 NUP62CLQ9H1M0 184 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 CNNM2Q9H8M5 875 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 LEMD3Q9Y2U8 911 aa12.75□□□□□ -0.37
HIPK2-203ENST00000428878 MBD3O95983 291 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms