RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
CECR3-201ENST00000428828 RNF113AO15541 343 aaKnown RBP13.37□□□□□ -0.27
CECR3-201ENST00000428828 PDE6AP16499 860 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 CHMLP26374 656 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 SCNN1DP51172 638 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 CASC1Q6TDU7 716 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 KIAA1524Q8TCG1 905 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 FAM227BQ96M60 508 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 TTF2Q9UNY4 1162 aaKnown RBP13.37□□□□□ -0.27
CECR3-201ENST00000428828 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 A0A0D9SFI3 127 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 ADD2P35612 726 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
CECR3-201ENST00000428828 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
CECR3-201ENST00000428828 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
CECR3-201ENST00000428828 SEC62Q99442 399 aaKnown RBP13.37□□□□□ -0.27
CECR3-201ENST00000428828 RFX7Q2KHR2 1363 aa13.36□□□□□ -0.27
CECR3-201ENST00000428828 ZBTB22O15209 634 aa13.36□□□□□ -0.27
CECR3-201ENST00000428828 CYP7A1P22680 504 aa13.36□□□□□ -0.27
CECR3-201ENST00000428828 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
CECR3-201ENST00000428828 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
CECR3-201ENST00000428828 ZNF384Q8TF68 577 aa13.36□□□□□ -0.27
CECR3-201ENST00000428828 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
CECR3-201ENST00000428828 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
CECR3-201ENST00000428828 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
CECR3-201ENST00000428828 BAZ2AQ9UIF9 1905 aaKnown RBP13.36□□□□□ -0.27
CECR3-201ENST00000428828 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
CECR3-201ENST00000428828 NCBP1Q09161 790 aaKnown RBP13.35□□□□□ -0.27
CECR3-201ENST00000428828 TNIP1Q15025 636 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 KRT222Q8N1A0 295 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 MIGA1Q8NAN2 632 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 IL25Q9H293 177 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
CECR3-201ENST00000428828 FOCADQ5VW36 1801 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 M0R2C6 588 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 HIP1O00291 1037 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
CECR3-201ENST00000428828 PUS7LQ9H0K6 701 aaKnown RBP13.35□□□□□ -0.27
CECR3-201ENST00000428828 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 MYO3BQ8WXR4 1341 aa13.35□□□□□ -0.27
CECR3-201ENST00000428828 NAV1Q8NEY1 1877 aa13.34□□□□□ -0.27
CECR3-201ENST00000428828 MAST3O60307 1309 aa13.34□□□□□ -0.27
CECR3-201ENST00000428828 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
CECR3-201ENST00000428828 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
CECR3-201ENST00000428828 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
CECR3-201ENST00000428828 APPBP2Q92624 585 aa13.34□□□□□ -0.27
CECR3-201ENST00000428828 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
CECR3-201ENST00000428828 USP25Q9UHP3 1055 aa13.34□□□□□ -0.27
CECR3-201ENST00000428828 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 CAPN2P17655 700 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
CECR3-201ENST00000428828 GSTO1P78417 241 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
CECR3-201ENST00000428828 MYH1P12882 1939 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 MROH7-TTC4A0A0A0MT08 1334 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 DDNO94850 711 aaPredicted RBP13.33□□□□□ -0.28
CECR3-201ENST00000428828 ZNF589Q86UQ0 364 aaPredicted RBP13.33□□□□□ -0.28
CECR3-201ENST00000428828 AGBL3Q8NEM8 1001 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 KIF18AQ8NI77 898 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 SUGT1Q9Y2Z0 365 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 PCDHAC2Q9Y5I4 1007 aa13.33□□□□□ -0.28
CECR3-201ENST00000428828 MBD4O95243 580 aa13.32□□□□□ -0.28
CECR3-201ENST00000428828 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
CECR3-201ENST00000428828 CRKP46108 304 aa13.32□□□□□ -0.28
CECR3-201ENST00000428828 DYNLL1P63167 89 aaKnown RBP13.32□□□□□ -0.28
CECR3-201ENST00000428828 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
CECR3-201ENST00000428828 GPC2Q8N158 579 aa13.32□□□□□ -0.28
CECR3-201ENST00000428828 TEKT1Q969V4 418 aa13.32□□□□□ -0.28
CECR3-201ENST00000428828 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
CECR3-201ENST00000428828 ARMT1Q9H993 441 aa13.32□□□□□ -0.28
CECR3-201ENST00000428828 MAGEB6P1A0A0J9YX57 407 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 ST18O60284 1047 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 BTDP43251 543 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 RNF214Q8ND24 703 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 GMLQ99445 158 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 LAMB1P07942 1786 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 SGSM2O43147 1006 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 GPAA1O43292 621 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 LDHCP07864 332 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
CECR3-201ENST00000428828 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
CECR3-201ENST00000428828 ANO2Q9NQ90 1003 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms