RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZCCHC17Q9NP64 241 aaKnown RBP21.06■□□□□ 0.96
TRIM39-209ENST00000428728 DDX4Q9NQI0 724 aaKnown RBP21.06■□□□□ 0.96
TRIM39-209ENST00000428728 KIAA0100Q14667 2235 aaKnown RBP21.06■□□□□ 0.96
TRIM39-209ENST00000428728 TLR2O60603 784 aa21.05■□□□□ 0.96
TRIM39-209ENST00000428728 ECM2O94769 699 aaPredicted RBP21.05■□□□□ 0.96
TRIM39-209ENST00000428728 ARID4AP29374 1257 aaPredicted RBP21.05■□□□□ 0.96
TRIM39-209ENST00000428728 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
TRIM39-209ENST00000428728 TBC1D9Q6ZT07 1266 aa21.05■□□□□ 0.96
TRIM39-209ENST00000428728 SH3BP5LQ7L8J4 393 aa21.05■□□□□ 0.96
TRIM39-209ENST00000428728 ITPRIPQ8IWB1 547 aa21.05■□□□□ 0.96
TRIM39-209ENST00000428728 ZNF384Q8TF68 577 aa21.05■□□□□ 0.96
TRIM39-209ENST00000428728 SIPA1L1O43166 1804 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 POTEFA5A3E0 1075 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 DDTLA6NHG4 134 aaPredicted RBP21.04■□□□□ 0.96
TRIM39-209ENST00000428728 SLURP2P0DP57 97 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 MCAMP43121 646 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 POLA2Q14181 598 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 FAM163AQ96GL9 167 aaPredicted RBP21.04■□□□□ 0.96
TRIM39-209ENST00000428728 ARHGAP39Q9C0H5 1083 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 RAI14Q9P0K7 980 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 KCNH4Q9UQ05 1017 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 PTCH2Q9Y6C5 1203 aa21.04■□□□□ 0.96
TRIM39-209ENST00000428728 RLBP1P12271 317 aa21.03■□□□□ 0.96
TRIM39-209ENST00000428728 ARHGEF6Q15052 776 aa21.03■□□□□ 0.96
TRIM39-209ENST00000428728 PICK1Q9NRD5 415 aa21.03■□□□□ 0.96
TRIM39-209ENST00000428728 GPR75-ASB3A0A0A6YYF3 556 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 PHF20L1A8MW92 1017 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 PDHXO00330 501 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 UQCRFS1P1P0C7P4 283 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 RHBDL3P58872 404 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 GSTO1P78417 241 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 LACTBP83111 547 aaPredicted RBP21.02■□□□□ 0.96
TRIM39-209ENST00000428728 KIF22Q14807 665 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 ANKRD23Q86SG2 305 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 SCYL3Q8IZE3 742 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 ARMC5Q96C12 935 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 NSUN4Q96CB9 384 aaKnown RBP21.02■□□□□ 0.96
TRIM39-209ENST00000428728 CPA4Q9UI42 421 aa21.02■□□□□ 0.96
TRIM39-209ENST00000428728 CENPFP49454 3210 aa21.02■□□□□ 0.95
TRIM39-209ENST00000428728 SLC9C1Q4G0N8 1177 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 TNNI3KQ59H18 835 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 TTC39AQ5SRH9 613 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 SSH3Q8TE77 659 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 DBNDD2Q9BQY9 259 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 LRP2BPQ9P2M1 347 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 FPGT-TNNI3KV9GXZ4 949 aa21.01■□□□□ 0.95
TRIM39-209ENST00000428728 LOC285556D6RIA3 1793 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 FAM196BA6NMK8 535 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 SURF6O75683 361 aaKnown RBP21■□□□□ 0.95
TRIM39-209ENST00000428728 LDHCP07864 332 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 ATP8B2P98198 1209 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 MOGSQ13724 837 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 FRMD4AQ9P2Q2 1039 aaPredicted RBP21■□□□□ 0.95
TRIM39-209ENST00000428728 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 MYH1P12882 1939 aa21■□□□□ 0.95
TRIM39-209ENST00000428728 PTPRAP18433 802 aa20.99■□□□□ 0.95
TRIM39-209ENST00000428728 ZHX2Q9Y6X8 837 aa20.99■□□□□ 0.95
TRIM39-209ENST00000428728 ADGRA2Q96PE1 1338 aa20.99■□□□□ 0.95
TRIM39-209ENST00000428728 CXCL11O14625 94 aa20.98■□□□□ 0.95
TRIM39-209ENST00000428728 PRPF38BQ5VTL8 546 aaKnown RBP20.98■□□□□ 0.95
TRIM39-209ENST00000428728 C17orf99Q6UX52 265 aa20.98■□□□□ 0.95
TRIM39-209ENST00000428728 GADL1Q6ZQY3 521 aa20.98■□□□□ 0.95
TRIM39-209ENST00000428728 TEX11Q8IYF3 940 aa20.98■□□□□ 0.95
TRIM39-209ENST00000428728 ZNF333Q96JL9 665 aa20.98■□□□□ 0.95
TRIM39-209ENST00000428728 GPR108Q9NPR9 543 aa20.98■□□□□ 0.95
TRIM39-209ENST00000428728 COL2A1P02458 1487 aaPredicted RBP20.98■□□□□ 0.95
TRIM39-209ENST00000428728 MYCP01106 439 aaPredicted RBP20.97■□□□□ 0.95
TRIM39-209ENST00000428728 CCDC158Q5M9N0 1113 aa20.97■□□□□ 0.95
TRIM39-209ENST00000428728 CCDC84Q86UT8 332 aaPredicted RBP20.97■□□□□ 0.95
TRIM39-209ENST00000428728 PARK7Q99497 189 aaKnown RBP20.97■□□□□ 0.95
TRIM39-209ENST00000428728 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
TRIM39-209ENST00000428728 A0A0G2JLL6 359 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 ZBTB7BO15156 539 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 CTNND1O60716 968 aaKnown RBP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 CYP2C8P10632 490 aa20.96■□□□□ 0.95
TRIM39-209ENST00000428728 MAP3K10Q02779 954 aa20.96■□□□□ 0.95
TRIM39-209ENST00000428728 GPAT2Q6NUI2 795 aa20.96■□□□□ 0.95
TRIM39-209ENST00000428728 PRRT2Q7Z6L0 340 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 NBPF11Q86T75 865 aa20.96■□□□□ 0.95
TRIM39-209ENST00000428728 SH3RF3Q8TEJ3 882 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 SH3TC2Q8TF17 1288 aa20.96■□□□□ 0.95
TRIM39-209ENST00000428728 OSBPL5Q9H0X9 879 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRIM39-209ENST00000428728 TRIM75PA6NK02 468 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 EN2P19622 333 aaPredicted RBP20.95■□□□□ 0.94
TRIM39-209ENST00000428728 CTGFP29279 349 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 PSMC4P43686 418 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 NAA16Q6N069 864 aaPredicted RBP20.95■□□□□ 0.94
TRIM39-209ENST00000428728 PANK1Q8TE04 598 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 TRIM47Q96LD4 638 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 TMEM106CQ9BVX2 250 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 AATFQ9NY61 560 aaKnown RBP eCLIP20.95■□□□□ 0.94
TRIM39-209ENST00000428728 TLR7Q9NYK1 1049 aaKnown RBP20.95■□□□□ 0.94
TRIM39-209ENST00000428728 AFG3L2Q9Y4W6 797 aa20.95■□□□□ 0.94
TRIM39-209ENST00000428728 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
TRIM39-209ENST00000428728 MAP4K4O95819 1239 aaPredicted RBP20.94■□□□□ 0.94
TRIM39-209ENST00000428728 FASTKD5Q7L8L6 764 aaKnown RBP20.94■□□□□ 0.94
TRIM39-209ENST00000428728 DBNLQ9UJU6 430 aaKnown RBP20.94■□□□□ 0.94
TRIM39-209ENST00000428728 BRCA2P51587 3418 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms