RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
SMC1A-203ENST00000428014 DIXDC1Q155Q3 683 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 AACSQ86V21 672 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 ZNF384Q8TF68 577 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 SLC10A4Q96EP9 437 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 NOL10Q9BSC4 688 aaKnown RBP11.14□□□□□ -0.63
SMC1A-203ENST00000428014 ZNF341Q9BYN7 854 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 FAM198AQ9UFP1 575 aa11.14□□□□□ -0.63
SMC1A-203ENST00000428014 AOX1Q06278 1338 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 SPDYE5A6NIY4 337 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 TCP10L2B9ZVM9 353 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 HSPA8P11142 646 aaKnown RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 BTDP43251 543 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 ERO1BQ86YB8 467 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 TMEM39BQ9GZU3 492 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
SMC1A-203ENST00000428014 CSADQ9Y600 493 aa11.13□□□□□ -0.63
SMC1A-203ENST00000428014 UBE2Q2LH0YL09 131 aa11.12□□□□□ -0.63
SMC1A-203ENST00000428014 CD44P16070 742 aaKnown RBP11.12□□□□□ -0.63
SMC1A-203ENST00000428014 PPATQ06203 517 aa11.12□□□□□ -0.63
SMC1A-203ENST00000428014 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
SMC1A-203ENST00000428014 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
SMC1A-203ENST00000428014 GPATCH3Q96I76 525 aa11.12□□□□□ -0.63
SMC1A-203ENST00000428014 WNK4Q96J92 1243 aa11.12□□□□□ -0.63
SMC1A-203ENST00000428014 RAI14Q9P0K7 980 aa11.12□□□□□ -0.63
SMC1A-203ENST00000428014 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 CTNND1O60716 968 aaKnown RBP11.11□□□□□ -0.63
SMC1A-203ENST00000428014 AOC2O75106 756 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 ZAP70P43403 619 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 RGS3P49796 1198 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 GTF2A2P52657 109 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 NFIAQ12857 509 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 PI16Q6UXB8 463 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
SMC1A-203ENST00000428014 HAUS7Q99871 368 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 CCDC8Q9H0W5 538 aaPredicted RBP11.11□□□□□ -0.63
SMC1A-203ENST00000428014 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
SMC1A-203ENST00000428014 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
SMC1A-203ENST00000428014 CXCL11O14625 94 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 PYGBP11216 843 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 PPIL2Q13356 520 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 VGLL4Q14135 290 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 UBE3CQ15386 1083 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
SMC1A-203ENST00000428014 ZSCAN25Q6NSZ9 544 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMC1A-203ENST00000428014 EHD4Q9H223 541 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 ECHDC1Q9NTX5 307 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 RNF186Q9NXI6 227 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 TLR7Q9NYK1 1049 aaKnown RBP11.1□□□□□ -0.63
SMC1A-203ENST00000428014 PI4KBQ9UBF8 816 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
SMC1A-203ENST00000428014 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
SMC1A-203ENST00000428014 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 WRNIP1Q96S55 665 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 IL1RAPL2Q9NP60 686 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 SLC45A1Q9Y2W3 748 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 PCDHB15Q9Y5E8 787 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 SNCAIPQ9Y6H5 919 aa11.09□□□□□ -0.63
SMC1A-203ENST00000428014 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 ERC2O15083 957 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
SMC1A-203ENST00000428014 CETPP11597 493 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 CACNB3P54284 484 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 SNAPC2Q13487 334 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 SMC5Q8IY18 1101 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 SCYL3Q8IZE3 742 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 ZIC5Q96T25 663 aa11.08□□□□□ -0.64
SMC1A-203ENST00000428014 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
SMC1A-203ENST00000428014 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
SMC1A-203ENST00000428014 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
SMC1A-203ENST00000428014 GLRX3O76003 335 aaKnown RBP11.07□□□□□ -0.64
SMC1A-203ENST00000428014 LBX1P52954 281 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 GIMAP6Q6P9H5 292 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 TEX11Q8IYF3 940 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 CLMNQ96JQ2 1002 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 RIOK1Q9BRS2 568 aaKnown RBP11.07□□□□□ -0.64
SMC1A-203ENST00000428014 PAG1Q9NWQ8 432 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 SCAF8Q9UPN6 1271 aaKnown RBP11.07□□□□□ -0.64
SMC1A-203ENST00000428014 FLT1P17948 1338 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 SALL3Q9BXA9 1300 aa11.07□□□□□ -0.64
SMC1A-203ENST00000428014 TCRBV5S4A2TA0A5A2 114 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms