RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, human

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-204	ENST00000427778	HSP90AB4P	Q58FF6	505 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	LDLRAD1	Q5T700	205 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	C20orf194	Q5TEA3	1177 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	FAM83A	Q86UY5	434 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	SIRT2	Q8IXJ6	389 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	TDRD3	Q9H7E2	651 aa	Known RBP	10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	SCAF8	Q9UPN6	1271 aa	Known RBP	10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	CDK5RAP2	Q96SN8	1893 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	KIAA0100	Q14667	2235 aa	Known RBP	10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	FOCAD	Q5VW36	1801 aa		10.86	□□□□□ -0.67
LINC00963-204	ENST00000427778	GAK	O14976	1311 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	RASA3	Q14644	834 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	SUPT20HL1	Q3ZLR7	823 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	PRAMEF18	Q5VWM3	479 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	RASAL3	Q86YV0	1011 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	SPATA5	Q8NB90	893 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	TEPSIN	Q96N21	525 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	NEUROD6	Q96NK8	337 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	VEZT	Q9HBM0	779 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	HMG20B	Q9P0W2	317 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	DAGLA	Q9Y4D2	1042 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	RFX7	Q2KHR2	1363 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	AK9	Q5TCS8	1911 aa		10.85	□□□□□ -0.67
LINC00963-204	ENST00000427778	MCAM	P43121	646 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	TNNI2	P48788	182 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	DIXDC1	Q155Q3	683 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	GORAB	Q5T7V8	394 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	ARMC9	Q7Z3E5	817 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	SLF2	Q8IX21	1173 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	PDCD7	Q8N8D1	485 aa	Known RBP	10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	DBNDD2	Q9BQY9	259 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	TMOD2	Q9NZR1	351 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	DBNL	Q9UJU6	430 aa	Known RBP	10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	EXOC6B	Q9Y2D4	811 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	TRIOBP	Q9H2D6	2365 aa		10.84	□□□□□ -0.67
LINC00963-204	ENST00000427778	PPP1R12B	O60237	982 aa	Predicted RBP	10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	RRP1	P56182	461 aa	Known RBP	10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	CCDC158	Q5M9N0	1113 aa		10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	MOB2	Q70IA6	237 aa		10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	ZNF384	Q8TF68	577 aa		10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	EAF2	Q96CJ1	260 aa	Predicted RBP	10.83	□□□□□ -0.68
LINC00963-204	ENST00000427778	CEP290	O15078	2479 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	MYH7	P12883	1935 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	COL2A1	P02458	1487 aa	Predicted RBP	10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	UBE2Q2L	H0YL09	131 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	RAB11FIP3	O75154	756 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	TBC1D8	O95759	1140 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	MAP4K4	O95819	1239 aa	Predicted RBP	10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	CDC42EP5	Q6NZY7	148 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	TMED8	Q6PL24	325 aa	Predicted RBP	10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	PI16	Q6UXB8	463 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	DZIP1	Q86YF9	867 aa	Known RBP	10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	RHPN1	Q8TCX5	695 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	HOOK2	Q96ED9	719 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	KIF1BP	Q96EK5	621 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	IDI2	Q9BXS1	227 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	TMEM39B	Q9GZU3	492 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	ABCF2	Q9UG63	623 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	MROH7-TTC4	A0A0A0MT08	1334 aa		10.82	□□□□□ -0.68
LINC00963-204	ENST00000427778	GPR75-ASB3	A0A0A6YYF3	556 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	POTEB3	A0JP26	581 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	TCP10L2	B9ZVM9	353 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	IREB2	P48200	963 aa	Known RBP	10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	CACNB3	P54284	484 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	GSTO1	P78417	241 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	MECOM	Q03112	1051 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	TTLL12	Q14166	644 aa	Predicted RBP	10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	TTC39A	Q5SRH9	613 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	POTEB	Q6S5H4	581 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	ERICH6	Q7L0X2	663 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	FAM151A	Q8WW52	585 aa		10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	NSUN4	Q96CB9	384 aa	Known RBP	10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	TLR7	Q9NYK1	1049 aa	Known RBP	10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	ANGEL1	Q9UNK9	670 aa	Known RBP	10.81	□□□□□ -0.68
LINC00963-204	ENST00000427778	ATRNL1	Q5VV63	1379 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	GPR25	O00155	361 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	DLL1	O00548	723 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	ENTPD3	O75355	529 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	USP2	O75604	605 aa	Predicted RBP	10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	CYP2E1	P05181	493 aa	Predicted RBP	10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	LDHC	P07864	332 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	ZBTB48	P10074	688 aa	Predicted RBP	10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	NOM1	Q5C9Z4	860 aa	Known RBP	10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	AACS	Q86V21	672 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	ANKRD13A	Q8IZ07	590 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	CLASRP	Q8N2M8	674 aa	Known RBP	10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	FAM198A	Q9UFP1	575 aa		10.8	□□□□□ -0.68
LINC00963-204	ENST00000427778	WDHD1	O75717	1129 aa	Predicted RBP	10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	RHBDL3	P58872	404 aa		10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	NFIA	Q12857	509 aa		10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	SPRYD7	Q5W111	196 aa		10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	TBC1D9	Q6ZT07	1266 aa		10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
LINC00963-204	ENST00000427778	YTHDC1	Q96MU7	727 aa	Known RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms