RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 MGAMO43451 1857 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 CYP2C8P10632 490 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 SCYL3Q8IZE3 742 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-213ENST00000427007 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-213ENST00000427007 AKAP2Q9Y2D5 859 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 PTPRFP10586 1907 aa12.64□□□□□ -0.39
HDLBP-213ENST00000427007 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
HDLBP-213ENST00000427007 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 BCAR3O75815 825 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-213ENST00000427007 GNRH1P01148 92 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 TRIM27P14373 513 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 OSBPP22059 807 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 MECOMQ03112 1051 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 MTX1Q13505 466 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
HDLBP-213ENST00000427007 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-213ENST00000427007 GPAT2Q6NUI2 795 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 PICK1Q9NRD5 415 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 HMG20BQ9P0W2 317 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 ZHX2Q9Y6X8 837 aa12.63□□□□□ -0.39
HDLBP-213ENST00000427007 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 CXCL11O14625 94 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 ZBTB22O15209 634 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 PTPRAP18433 802 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 PRMT2P55345 433 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 MTFR1Q15390 333 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 CCDC84Q86UT8 332 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-213ENST00000427007 ZNF384Q8TF68 577 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-213ENST00000427007 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
HDLBP-213ENST00000427007 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
HDLBP-213ENST00000427007 GPR75-ASB3A0A0A6YYF3 556 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 A0A0G2JLL6 359 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-213ENST00000427007 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
HDLBP-213ENST00000427007 GNAI2P04899 355 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 HOXD10P28358 340 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 RHBDL3P58872 404 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 PRRT2Q7Z6L0 340 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-213ENST00000427007 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
HDLBP-213ENST00000427007 KIAA0100Q14667 2235 aaKnown RBP12.61□□□□□ -0.39
HDLBP-213ENST00000427007 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 BCRP11274 1271 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 GRK4P32298 578 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 PRKCZQ05513 592 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDLBP-213ENST00000427007 HABP4Q5JVS0 413 aaKnown RBP12.6□□□□□ -0.39
HDLBP-213ENST00000427007 FASTKD5Q7L8L6 764 aaKnown RBP12.6□□□□□ -0.39
HDLBP-213ENST00000427007 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
HDLBP-213ENST00000427007 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
HDLBP-213ENST00000427007 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
HDLBP-213ENST00000427007 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-213ENST00000427007 MCAMP43121 646 aa12.59□□□□□ -0.39
HDLBP-213ENST00000427007 FCGRTP55899 365 aa12.59□□□□□ -0.39
HDLBP-213ENST00000427007 GSTO1P78417 241 aa12.59□□□□□ -0.39
HDLBP-213ENST00000427007 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
HDLBP-213ENST00000427007 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
HDLBP-213ENST00000427007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.391e-17■■□□□ 11.9
HDLBP-213ENST00000427007 GABRQQ9UN88 632 aa12.59□□□□□ -0.39
HDLBP-213ENST00000427007 LDHCP07864 332 aa12.58□□□□□ -0.4
HDLBP-213ENST00000427007 CDK5RAP2Q96SN8 1893 aa12.58□□□□□ -0.4
HDLBP-213ENST00000427007 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-213ENST00000427007 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
HDLBP-213ENST00000427007 LRP2BPQ9P2M1 347 aa12.58□□□□□ -0.4
HDLBP-213ENST00000427007 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-213ENST00000427007 MYO5AQ9Y4I1 1855 aaKnown RBP12.58□□□□□ -0.4
HDLBP-213ENST00000427007 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
HDLBP-213ENST00000427007 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
HDLBP-213ENST00000427007 TBC1D12O60347 775 aa12.57□□□□□ -0.4
HDLBP-213ENST00000427007 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
HDLBP-213ENST00000427007 CCL5P13501 91 aa12.57□□□□□ -0.4
HDLBP-213ENST00000427007 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
HDLBP-213ENST00000427007 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
HDLBP-213ENST00000427007 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-213ENST00000427007 SMCR8Q8TEV9 937 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-213ENST00000427007 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
HDLBP-213ENST00000427007 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 TNPO2O14787 897 aaKnown RBP12.56□□□□□ -0.4
HDLBP-213ENST00000427007 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms