RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SNCAIPQ9Y6H5 919 aa21.85■■□□□ 1.09
IGHV3-47-201ENST00000425060 MANSC4A6NHS7 340 aaPredicted RBP21.84■■□□□ 1.09
IGHV3-47-201ENST00000425060 INHBEP58166 350 aa21.84■■□□□ 1.09
IGHV3-47-201ENST00000425060 SREBF2Q12772 1141 aa21.84■■□□□ 1.09
IGHV3-47-201ENST00000425060 CNKSR2Q8WXI2 1034 aa21.84■■□□□ 1.09
IGHV3-47-201ENST00000425060 OPTNQ96CV9 577 aa21.84■■□□□ 1.09
IGHV3-47-201ENST00000425060 WRNIP1Q96S55 665 aa21.84■■□□□ 1.09
IGHV3-47-201ENST00000425060 SMARCA5O60264 1052 aaPredicted RBP21.83■■□□□ 1.09
IGHV3-47-201ENST00000425060 PICALMQ13492 652 aa21.83■■□□□ 1.09
IGHV3-47-201ENST00000425060 SH3RF3Q8TEJ3 882 aaPredicted RBP21.83■■□□□ 1.09
IGHV3-47-201ENST00000425060 ZKSCAN4Q969J2 545 aaPredicted RBP21.83■■□□□ 1.09
IGHV3-47-201ENST00000425060 AATFQ9NY61 560 aaKnown RBP eCLIP21.83■■□□□ 1.09
IGHV3-47-201ENST00000425060 CSADQ9Y600 493 aa21.83■■□□□ 1.09
IGHV3-47-201ENST00000425060 TESPA1A2RU30 521 aaPredicted RBP21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 SPDYE5A6NIY4 337 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 BAG3O95817 575 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 ATP5JP18859 108 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 INPP5BP32019 993 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 TNS4Q8IZW8 715 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 MS4A4AQ96JQ5 239 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 DOCK2Q92608 1830 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 AK9Q5TCS8 1911 aa21.82■■□□□ 1.08
IGHV3-47-201ENST00000425060 PHF20L1A8MW92 1017 aa21.81■■□□□ 1.08
IGHV3-47-201ENST00000425060 TMED8Q6PL24 325 aaPredicted RBP21.81■■□□□ 1.08
IGHV3-47-201ENST00000425060 TEX11Q8IYF3 940 aa21.81■■□□□ 1.08
IGHV3-47-201ENST00000425060 CFHR5Q9BXR6 569 aa21.81■■□□□ 1.08
IGHV3-47-201ENST00000425060 COL2A1P02458 1487 aaPredicted RBP21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 SLURP2P0DP57 97 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 PLCG2P16885 1265 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 CYP7A1P22680 504 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 MAP3K12Q12852 859 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 TTF1Q15361 905 aaPredicted RBP21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 IFFO2Q5TF58 517 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 ERO1BQ86YB8 467 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 IFNL1Q8IU54 200 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 MAGEB6Q8N7X4 407 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 NOL10Q9BSC4 688 aaKnown RBP21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 OSBPL5Q9H0X9 879 aaPredicted RBP21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 BCL11AQ9H165 835 aa21.8■■□□□ 1.08
IGHV3-47-201ENST00000425060 CASP8AP2Q9UKL3 1982 aa21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 IGF2BP3O00425 579 aaKnown RBP eCLIP21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 TBC1D12O60347 775 aa21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 NOL9Q5SY16 702 aaKnown RBP21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 ZSCAN29Q8IWY8 852 aaPredicted RBP21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 PTPN18Q99952 460 aa21.79■■□□□ 1.08
IGHV3-47-201ENST00000425060 TBC1D8O95759 1140 aa21.78■■□□□ 1.08
IGHV3-47-201ENST00000425060 EDC3Q96F86 508 aaKnown RBP21.78■■□□□ 1.08
IGHV3-47-201ENST00000425060 OTUD5Q96G74 571 aa21.78■■□□□ 1.08
IGHV3-47-201ENST00000425060 DNAJC2Q99543 621 aaKnown RBP21.78■■□□□ 1.08
IGHV3-47-201ENST00000425060 HAUS7Q99871 368 aa21.78■■□□□ 1.08
IGHV3-47-201ENST00000425060 BOLA2Q9H3K6 86 aa21.78■■□□□ 1.08
IGHV3-47-201ENST00000425060 GOLIM4O00461 696 aa21.77■■□□□ 1.08
IGHV3-47-201ENST00000425060 ALDH1A1P00352 501 aa21.77■■□□□ 1.08
IGHV3-47-201ENST00000425060 NOM1Q5C9Z4 860 aaKnown RBP21.77■■□□□ 1.08
IGHV3-47-201ENST00000425060 R3HDMLQ9H3Y0 253 aa21.77■■□□□ 1.08
IGHV3-47-201ENST00000425060 IRF6O14896 467 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 GTF2A2P52657 109 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 PPATQ06203 517 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 PPIL2Q13356 520 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 TGFBRAP1Q8WUH2 860 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 BRI3BPQ8WY22 251 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 CDK5RAP2Q96SN8 1893 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 PAG1Q9NWQ8 432 aa21.76■■□□□ 1.07
IGHV3-47-201ENST00000425060 TCRBV5S4A2TA0A5A2 114 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 PDE6AP16499 860 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 AAMPQ13685 434 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 CERS3Q8IU89 383 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 MIGA1Q8NAN2 632 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 RIOK1Q9BRS2 568 aaKnown RBP21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 ECHDC1Q9NTX5 307 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 FLT1P17948 1338 aa21.75■■□□□ 1.07
IGHV3-47-201ENST00000425060 FOCADQ5VW36 1801 aa21.74■■□□□ 1.07
IGHV3-47-201ENST00000425060 HDAC1Q13547 482 aaPredicted RBP21.74■■□□□ 1.07
IGHV3-47-201ENST00000425060 SLC9C2Q5TAH2 1124 aa21.74■■□□□ 1.07
IGHV3-47-201ENST00000425060 MAPKAPK5Q8IW41 473 aa21.74■■□□□ 1.07
IGHV3-47-201ENST00000425060 DHX36Q9H2U1 1008 aaKnown RBP21.74■■□□□ 1.07
IGHV3-47-201ENST00000425060 CCL15-CCL14A0A0B4J2E2 113 aa21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 GPR25O00155 361 aa21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 CCL15Q16663 113 aa21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 METTL16Q86W50 562 aaKnown RBP21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 SCYL3Q8IZE3 742 aa21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 KCNH4Q9UQ05 1017 aa21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 ZNF532Q9HCE3 1301 aa21.73■■□□□ 1.07
IGHV3-47-201ENST00000425060 FAM196BA6NMK8 535 aa21.72■■□□□ 1.07
IGHV3-47-201ENST00000425060 CTNND1O60716 968 aaKnown RBP21.72■■□□□ 1.07
IGHV3-47-201ENST00000425060 OTUD7BQ6GQQ9 843 aa21.72■■□□□ 1.07
IGHV3-47-201ENST00000425060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.72■■□□□ 1.07
IGHV3-47-201ENST00000425060 PI4KBQ9UBF8 816 aa21.72■■□□□ 1.07
IGHV3-47-201ENST00000425060 SUPT16HQ9Y5B9 1047 aaKnown RBP21.72■■□□□ 1.07
IGHV3-47-201ENST00000425060 SIPA1L1O43166 1804 aa21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 CETPP11597 493 aa21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 PTPRAP18433 802 aa21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 SNAPC2Q13487 334 aa21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 RRP1BQ14684 758 aaKnown RBP21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 FAM43AQ8N2R8 423 aa21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 ZNF296Q8WUU4 475 aaPredicted RBP21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 HERC5Q9UII4 1024 aaKnown RBP21.71■■□□□ 1.07
IGHV3-47-201ENST00000425060 ADD2P35612 726 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms