RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 HYPKQ9NX55 129 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 DBF4Q9UBU7 674 aaPredicted RBP6.9□□□□□ -1.3
VPS8-205ENST00000424721 LAS1LQ9Y4W2 734 aaKnown RBP6.9□□□□□ -1.3
VPS8-205ENST00000424721 SH3TC1Q8TE82 1336 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 ZNF541Q9H0D2 1346 aa6.9□□□□□ -1.3
VPS8-205ENST00000424721 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
VPS8-205ENST00000424721 FOXN1O15353 648 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 HOXB7P09629 217 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 BMP1P13497 986 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 EPS15P42566 896 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 LBX1P52954 281 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 CBLBQ13191 982 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 GRAPQ13588 217 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 TSGA10IPQ3SY00 556 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 OLFM4Q6UX06 510 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 PLBD2Q8NHP8 589 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 GRAPLQ8TC17 118 aaPredicted RBP6.89□□□□□ -1.31
VPS8-205ENST00000424721 RUNDC1Q96C34 613 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 HHIPL1Q96JK4 782 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 CYLDQ9NQC7 956 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 GPRC5DQ9NZD1 345 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 CDHR2Q9BYE9 1310 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 RIC1Q4ADV7 1423 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 DLEC1Q9Y238 1755 aa6.89□□□□□ -1.31
VPS8-205ENST00000424721 FER1L6Q2WGJ9 1857 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 CCDC88AQ3V6T2 1871 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 SCN4AP35499 1836 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 SLX4Q8IY92 1834 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 FAM196BA6NMK8 535 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 CHL1O00533 1208 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 RPS12P25398 132 aaKnown RBP6.88□□□□□ -1.31
VPS8-205ENST00000424721 ERVK-9P63128 1117 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 CXCL9Q07325 125 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 KIAA2012Q0VF49 1180 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 AOC3Q16853 763 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 XAGE3Q8WTP9 111 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 DPF2Q92785 391 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 CAPNS2Q96L46 248 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 THUMPD2Q9BTF0 503 aaKnown RBP6.88□□□□□ -1.31
VPS8-205ENST00000424721 ZC3H12CQ9C0D7 883 aaKnown RBP6.88□□□□□ -1.31
VPS8-205ENST00000424721 PGAP2Q9UHJ9 254 aa6.88□□□□□ -1.31
VPS8-205ENST00000424721 CNOT7Q9UIV1 285 aaKnown RBP6.88□□□□□ -1.31
VPS8-205ENST00000424721 DICER1Q9UPY3 1922 aaKnown RBP6.88□□□□□ -1.31
VPS8-205ENST00000424721 UBN2Q6ZU65 1347 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 LILRA1O75019 489 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 CELF2O95319 508 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 DDX58O95786 925 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 SCTRP47872 440 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 SCNN1DP51172 638 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 RPS8P62241 208 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 PDE4CQ08493 712 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 GRM1Q13255 1194 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 CYP2U1Q7Z449 544 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 C2orf69Q8N8R5 385 aa6.87□□□□□ -1.31
VPS8-205ENST00000424721 DCPSQ96C86 337 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 NSFL1CQ9UNZ2 370 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 RBM19Q9Y4C8 960 aaKnown RBP6.87□□□□□ -1.31
VPS8-205ENST00000424721 ABCC4O15439 1325 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 MYBBP1AQ9BQG0 1328 aaKnown RBP6.86□□□□□ -1.31
VPS8-205ENST00000424721 VIRMAQ69YN4 1812 aaKnown RBP6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L15C9J2P7 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L10C9JJH3 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L13C9JLJ4 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L11C9JVI0 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L21D6R901 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L18D6R9N7 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L22D6RA61 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L17D6RBQ6 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L19D6RCP7 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L20D6RJB6 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 RAD17O75943 681 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 ATG7O95352 703 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 RASA1P20936 1047 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 ADD1P35611 737 aaKnown RBP6.86□□□□□ -1.31
VPS8-205ENST00000424721 GMPSP49915 693 aaPredicted RBP6.86□□□□□ -1.31
VPS8-205ENST00000424721 MMP14P50281 582 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 GNAI1P63096 354 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 GTF2IP78347 998 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 USP17L24Q0WX57 530 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 NOGQ13253 232 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 CST9Q5W186 159 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 TRIM46Q7Z4K8 759 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 MEIOBQ8N635 442 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 ATP13A2Q9NQ11 1180 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 SIPA1L3O60292 1781 aaPredicted RBP6.86□□□□□ -1.31
VPS8-205ENST00000424721 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
VPS8-205ENST00000424721 ANKRD31Q8N7Z5 1873 aa6.85□□□□□ -1.31
VPS8-205ENST00000424721 IRS4O14654 1257 aaPredicted RBP6.85□□□□□ -1.31
VPS8-205ENST00000424721 HSPA8P11142 646 aaKnown RBP6.85□□□□□ -1.31
VPS8-205ENST00000424721 DDX10Q13206 875 aaKnown RBP6.85□□□□□ -1.31
VPS8-205ENST00000424721 ELOAQ14241 798 aaKnown RBP6.85□□□□□ -1.31
VPS8-205ENST00000424721 CCDC152Q4G0S7 254 aa6.85□□□□□ -1.31
VPS8-205ENST00000424721 CCDC30Q5VVM6 783 aa6.85□□□□□ -1.31
VPS8-205ENST00000424721 CYP4F22Q6NT55 531 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms