RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TICAM2Q86XR7 235 aa22.34■■□□□ 1.17
HDAC6-205ENST00000423941 TEX11Q8IYF3 940 aa22.34■■□□□ 1.17
HDAC6-205ENST00000423941 PPP1R12BO60237 982 aaPredicted RBP22.33■■□□□ 1.17
HDAC6-205ENST00000423941 ZFYP08048 801 aaPredicted RBP22.33■■□□□ 1.17
HDAC6-205ENST00000423941 ARMC9Q7Z3E5 817 aa22.33■■□□□ 1.17
HDAC6-205ENST00000423941 MIGA1Q8NAN2 632 aa22.33■■□□□ 1.17
HDAC6-205ENST00000423941 MKRN1Q9UHC7 482 aaKnown RBP22.33■■□□□ 1.17
HDAC6-205ENST00000423941 DDTLA6NHG4 134 aaPredicted RBP22.32■■□□□ 1.16
HDAC6-205ENST00000423941 UBE2Q2LH0YL09 131 aa22.32■■□□□ 1.16
HDAC6-205ENST00000423941 NEFLP07196 543 aa22.32■■□□□ 1.16
HDAC6-205ENST00000423941 CENPQQ7L2Z9 268 aaPredicted RBP22.32■■□□□ 1.16
HDAC6-205ENST00000423941 HOOK2Q96ED9 719 aa22.32■■□□□ 1.16
HDAC6-205ENST00000423941 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
HDAC6-205ENST00000423941 MAGEB6P1A0A0J9YX57 407 aa22.31■■□□□ 1.16
HDAC6-205ENST00000423941 RNF113AO15541 343 aaKnown RBP22.31■■□□□ 1.16
HDAC6-205ENST00000423941 VEGFBP49765 207 aa22.31■■□□□ 1.16
HDAC6-205ENST00000423941 JMYQ8N9B5 988 aa22.31■■□□□ 1.16
HDAC6-205ENST00000423941 TGFBRAP1Q8WUH2 860 aa22.31■■□□□ 1.16
HDAC6-205ENST00000423941 EVI5LQ96CN4 794 aa22.31■■□□□ 1.16
HDAC6-205ENST00000423941 ANGEL1Q9UNK9 670 aaKnown RBP22.31■■□□□ 1.16
HDAC6-205ENST00000423941 FZD1Q9UP38 647 aa22.31■■□□□ 1.16
HDAC6-205ENST00000423941 OTOFQ9HC10 1997 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 MYH1P12882 1939 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 SIPA1L1O43166 1804 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 FAM155AB1AL88 458 aaPredicted RBP22.3■■□□□ 1.16
HDAC6-205ENST00000423941 RGMBQ6NW40 437 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 THSD7BQ9C0I4 1608 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 FLT1P17948 1338 aa22.3■■□□□ 1.16
HDAC6-205ENST00000423941 TBC1D12O60347 775 aa22.29■■□□□ 1.16
HDAC6-205ENST00000423941 PICALMQ13492 652 aa22.29■■□□□ 1.16
HDAC6-205ENST00000423941 METTL16Q86W50 562 aaKnown RBP22.29■■□□□ 1.16
HDAC6-205ENST00000423941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.29■■□□□ 1.16
HDAC6-205ENST00000423941 APPBP2Q92624 585 aa22.29■■□□□ 1.16
HDAC6-205ENST00000423941 OSBP2Q969R2 916 aa22.29■■□□□ 1.16
HDAC6-205ENST00000423941 CAPNS2Q96L46 248 aa22.29■■□□□ 1.16
HDAC6-205ENST00000423941 PUS7LQ9H0K6 701 aaKnown RBP22.29■■□□□ 1.16
HDAC6-205ENST00000423941 DDX60LQ5H9U9 1706 aaKnown RBP22.28■■□□□ 1.16
HDAC6-205ENST00000423941 ECE1P42892 770 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 PRKG1Q13976 671 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 LRRFIP1Q32MZ4 808 aaKnown RBP22.28■■□□□ 1.16
HDAC6-205ENST00000423941 DCAF15Q66K64 600 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 CYP4F22Q6NT55 531 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.28■■□□□ 1.16
HDAC6-205ENST00000423941 LCORLQ8N3X6 602 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 CCDC102AQ96A19 550 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 CSRNP1Q96S65 589 aa22.28■■□□□ 1.16
HDAC6-205ENST00000423941 DHX36Q9H2U1 1008 aaKnown RBP22.28■■□□□ 1.16
HDAC6-205ENST00000423941 WDR33Q9C0J8 1336 aaKnown RBP22.28■■□□□ 1.16
HDAC6-205ENST00000423941 LAMB1P07942 1786 aa22.27■■□□□ 1.16
HDAC6-205ENST00000423941 IREB2P48200 963 aaKnown RBP22.27■■□□□ 1.16
HDAC6-205ENST00000423941 TTLL12Q14166 644 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-205ENST00000423941 MAPKAPK5Q8IW41 473 aa22.27■■□□□ 1.16
HDAC6-205ENST00000423941 PHF20L1A8MW92 1017 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 SLC10A3P09131 477 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 MAP3K9P80192 1104 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 ZMYM1Q5SVZ6 1142 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 MIGA2Q7L4E1 593 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 ANKRD13AQ8IZ07 590 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 CCDC136Q96JN2 1154 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 STRBPQ96SI9 672 aaKnown RBP22.26■■□□□ 1.15
HDAC6-205ENST00000423941 FSD1Q9BTV5 496 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 CRNKL1Q9BZJ0 848 aaKnown RBP22.26■■□□□ 1.15
HDAC6-205ENST00000423941 ARMT1Q9H993 441 aa22.26■■□□□ 1.15
HDAC6-205ENST00000423941 MBD4O95243 580 aa22.25■■□□□ 1.15
HDAC6-205ENST00000423941 ZNF157P51786 506 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-205ENST00000423941 RASAL3Q86YV0 1011 aa22.25■■□□□ 1.15
HDAC6-205ENST00000423941 ZSCAN29Q8IWY8 852 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-205ENST00000423941 ZNF341Q9BYN7 854 aa22.25■■□□□ 1.15
HDAC6-205ENST00000423941 ATP8A2Q9NTI2 1148 aa22.25■■□□□ 1.15
HDAC6-205ENST00000423941 PI4KBQ9UBF8 816 aa22.25■■□□□ 1.15
HDAC6-205ENST00000423941 MAP2K2P36507 400 aa22.24■■□□□ 1.15
HDAC6-205ENST00000423941 TTC22Q5TAA0 569 aa22.24■■□□□ 1.15
HDAC6-205ENST00000423941 FOXP4Q8IVH2 680 aaPredicted RBP22.24■■□□□ 1.15
HDAC6-205ENST00000423941 CLMNQ96JQ2 1002 aa22.24■■□□□ 1.15
HDAC6-205ENST00000423941 DCP1AQ9NPI6 582 aaPredicted RBP22.24■■□□□ 1.15
HDAC6-205ENST00000423941 PALD1Q9ULE6 856 aa22.24■■□□□ 1.15
HDAC6-205ENST00000423941 NAV1Q8NEY1 1877 aa22.24■■□□□ 1.15
HDAC6-205ENST00000423941 PRKAB2O43741 272 aa22.23■■□□□ 1.15
HDAC6-205ENST00000423941 SLURP2P0DP57 97 aa22.23■■□□□ 1.15
HDAC6-205ENST00000423941 USP5P45974 858 aa22.23■■□□□ 1.15
HDAC6-205ENST00000423941 AIDAQ96BJ3 306 aa22.23■■□□□ 1.15
HDAC6-205ENST00000423941 PCNTO95613 3336 aa22.22■■□□□ 1.15
HDAC6-205ENST00000423941 BAZ2AQ9UIF9 1905 aaKnown RBP22.22■■□□□ 1.15
HDAC6-205ENST00000423941 GSPT1P15170 499 aaKnown RBP22.22■■□□□ 1.15
HDAC6-205ENST00000423941 NOGQ13253 232 aa22.22■■□□□ 1.15
HDAC6-205ENST00000423941 VGLL4Q14135 290 aa22.22■■□□□ 1.15
HDAC6-205ENST00000423941 NOL9Q5SY16 702 aaKnown RBP22.22■■□□□ 1.15
HDAC6-205ENST00000423941 SDR42E1Q8WUS8 393 aa22.22■■□□□ 1.15
HDAC6-205ENST00000423941 SLC10A4Q96EP9 437 aa22.22■■□□□ 1.15
HDAC6-205ENST00000423941 SEC62Q99442 399 aaKnown RBP22.22■■□□□ 1.15
HDAC6-205ENST00000423941 PPP4R2Q9NY27 417 aa22.22■■□□□ 1.15
HDAC6-205ENST00000423941 HERC5Q9UII4 1024 aaKnown RBP22.22■■□□□ 1.15
HDAC6-205ENST00000423941 M0R2C6 588 aa22.21■■□□□ 1.15
HDAC6-205ENST00000423941 INPP5BP32019 993 aa22.21■■□□□ 1.15
HDAC6-205ENST00000423941 SPRYD7Q5W111 196 aa22.21■■□□□ 1.15
HDAC6-205ENST00000423941 WRNIP1Q96S55 665 aa22.21■■□□□ 1.15
HDAC6-205ENST00000423941 ZIC5Q96T25 663 aa22.21■■□□□ 1.15
HDAC6-205ENST00000423941 EHD4Q9H223 541 aa22.21■■□□□ 1.15
HDAC6-205ENST00000423941 SNCAIPQ9Y6H5 919 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms