RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 PICK1Q9NRD5 415 aa14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 HTTP42858 3142 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 GNRH1P01148 92 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 LDHCP07864 332 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 LACTBP83111 547 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 CAP1Q01518 475 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 OS9Q13438 667 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 PICALMQ13492 652 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 DIEXFQ68CQ4 756 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 PI16Q6UXB8 463 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 SH3BP5LQ7L8J4 393 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 ITPRIPQ8IWB1 547 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 MIER1Q8N108 512 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 NSUN4Q96CB9 384 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 DDX4Q9NQI0 724 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 DOCK1Q14185 1865 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 MAST2Q6P0Q8 1798 aa14.22□□□□□ -0.13
SQSTM1-203ENST00000422245 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 KIAA0100Q14667 2235 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 PHF20L1A8MW92 1017 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 PDHXO00330 501 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 CXCL11O14625 94 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 MCAMP43121 646 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 RHBDL3P58872 404 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 MAP3K10Q02779 954 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 TNNI3KQ59H18 835 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 PRPF38BQ5VTL8 546 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 ZNF384Q8TF68 577 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 PARK7Q99497 189 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 RAI14Q9P0K7 980 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 FPGT-TNNI3KV9GXZ4 949 aa14.21□□□□□ -0.13
SQSTM1-203ENST00000422245 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 DDTLA6NHG4 134 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 PRMT2P55345 433 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 MOGSQ13724 837 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 SLC9C1Q4G0N8 1177 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 ZNF333Q96JL9 665 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 PTCH2Q9Y6C5 1203 aa14.2□□□□□ -0.14
SQSTM1-203ENST00000422245 A0A0G2JLL6 359 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 CTNND1O60716 968 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 IGSF3O75054 1194 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 SLC34A2O95436 690 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 PTPRAP18433 802 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 CCDC158Q5M9N0 1113 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 TTC39AQ5SRH9 613 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 C17orf99Q6UX52 265 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 FASTKD5Q7L8L6 764 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 PRRT2Q7Z6L0 340 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 NBPF11Q86T75 865 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 ARHGAP39Q9C0H5 1083 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 LRP2BPQ9P2M1 347 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 ZHX2Q9Y6X8 837 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 ZSWIM8A7E2V4 1837 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 PTPRFP10586 1907 aa14.19□□□□□ -0.14
SQSTM1-203ENST00000422245 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 TBC1D12O60347 775 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 RLBP1P12271 317 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 ZNF512BQ96KM6 892 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 DBNDD2Q9BQY9 259 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 TMEM106CQ9BVX2 250 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 OSBPL5Q9H0X9 879 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 CPA4Q9UI42 421 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
SQSTM1-203ENST00000422245 ZBTB7BO15156 539 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-203ENST00000422245 PLCG2P16885 1265 aa14.17□□□□□ -0.14
SQSTM1-203ENST00000422245 GPAT2Q6NUI2 795 aa14.17□□□□□ -0.14
SQSTM1-203ENST00000422245 TEX11Q8IYF3 940 aa14.17□□□□□ -0.14
SQSTM1-203ENST00000422245 SLC45A1Q9Y2W3 748 aa14.17□□□□□ -0.14
SQSTM1-203ENST00000422245 AFG3L2Q9Y4W6 797 aa14.17□□□□□ -0.14
SQSTM1-203ENST00000422245 BAG3O95817 575 aa14.16□□□□□ -0.14
SQSTM1-203ENST00000422245 HOXD10P28358 340 aa14.16□□□□□ -0.14
SQSTM1-203ENST00000422245 NAA16Q6N069 864 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-203ENST00000422245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.16□□□□□ -0.146e-7■□□□□ 10.6
SQSTM1-203ENST00000422245 SNRKQ9NRH2 765 aa14.16□□□□□ -0.14
SQSTM1-203ENST00000422245 TRIM75PA6NK02 468 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 CYP2C8P10632 490 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 BCRP11274 1271 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 PSMC4P43686 418 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 CEP85Q6P2H3 762 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 GADL1Q6ZQY3 521 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 TRIM47Q96LD4 638 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 TBC1D2Q9BYX2 928 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 SRRDQ9UH36 339 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 HERC5Q9UII4 1024 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 ATAD5Q96QE3 1844 aa14.15□□□□□ -0.14
SQSTM1-203ENST00000422245 FMNL1O95466 1100 aaPredicted RBP14.14□□□□□ -0.15
SQSTM1-203ENST00000422245 CYP2E1P05181 493 aaPredicted RBP14.14□□□□□ -0.15
SQSTM1-203ENST00000422245 SLURP2P0DP57 97 aa14.14□□□□□ -0.15
SQSTM1-203ENST00000422245 MS4A1P11836 297 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms