RNA–Protein interactions for RNA: ENST00000421914.5

NCSTN-203, Transcript of nicastrin, humanhuman

TSL 4

Gene NCSTN, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-203ENST00000421914 DNAAF4Q8WXU2 420 aa17.12■□□□□ 0.33
NCSTN-203ENST00000421914 NOL9Q5SY16 702 aaKnown RBP17.11■□□□□ 0.33
NCSTN-203ENST00000421914 FAM151AQ8WW52 585 aa17.11■□□□□ 0.33
NCSTN-203ENST00000421914 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
NCSTN-203ENST00000421914 A0A0G2JLL6 359 aaPredicted RBP17.1■□□□□ 0.33
NCSTN-203ENST00000421914 APAF1O14727 1248 aa17.1■□□□□ 0.33
NCSTN-203ENST00000421914 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
NCSTN-203ENST00000421914 PRRT2Q7Z6L0 340 aaPredicted RBP17.1■□□□□ 0.33
NCSTN-203ENST00000421914 CDX2Q99626 313 aaPredicted RBP17.1■□□□□ 0.33
NCSTN-203ENST00000421914 RAPGEFL1Q9UHV5 662 aa17.1■□□□□ 0.33
NCSTN-203ENST00000421914 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
NCSTN-203ENST00000421914 FLIIQ13045 1269 aa17.09■□□□□ 0.33
NCSTN-203ENST00000421914 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
NCSTN-203ENST00000421914 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
NCSTN-203ENST00000421914 PFASO15067 1338 aa17.09■□□□□ 0.33
NCSTN-203ENST00000421914 MAST3O60307 1309 aa17.09■□□□□ 0.33
NCSTN-203ENST00000421914 PRUNE2Q8WUY3 3088 aa17.08■□□□□ 0.33
NCSTN-203ENST00000421914 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.32
NCSTN-203ENST00000421914 FBXO33Q7Z6M2 555 aa17.08■□□□□ 0.32
NCSTN-203ENST00000421914 SYMPKQ92797 1274 aaKnown RBP17.08■□□□□ 0.32
NCSTN-203ENST00000421914 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
NCSTN-203ENST00000421914 PUS3Q9BZE2 481 aaKnown RBP17.08■□□□□ 0.32
NCSTN-203ENST00000421914 OGDHLQ9ULD0 1010 aa17.08■□□□□ 0.32
NCSTN-203ENST00000421914 TRIM75PA6NK02 468 aa17.07■□□□□ 0.32
NCSTN-203ENST00000421914 NFIAQ12857 509 aa17.07■□□□□ 0.32
NCSTN-203ENST00000421914 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
NCSTN-203ENST00000421914 SCYL3Q8IZE3 742 aa17.07■□□□□ 0.32
NCSTN-203ENST00000421914 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
NCSTN-203ENST00000421914 SLC45A1Q9Y2W3 748 aa17.07■□□□□ 0.32
NCSTN-203ENST00000421914 PTPRAP18433 802 aa17.06■□□□□ 0.32
NCSTN-203ENST00000421914 LRRC26Q2I0M4 334 aa17.06■□□□□ 0.32
NCSTN-203ENST00000421914 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
NCSTN-203ENST00000421914 AFG3L2Q9Y4W6 797 aa17.06■□□□□ 0.32
NCSTN-203ENST00000421914 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
NCSTN-203ENST00000421914 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
NCSTN-203ENST00000421914 FAM110CQ1W6H9 321 aa17.05■□□□□ 0.32
NCSTN-203ENST00000421914 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
NCSTN-203ENST00000421914 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
NCSTN-203ENST00000421914 CYP2B6P20813 491 aa17.04■□□□□ 0.32
NCSTN-203ENST00000421914 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
NCSTN-203ENST00000421914 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
NCSTN-203ENST00000421914 SEMA6BQ9H3T3 888 aa17.04■□□□□ 0.32
NCSTN-203ENST00000421914 PNMA3Q9UL41 463 aa17.04■□□□□ 0.32
NCSTN-203ENST00000421914 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
NCSTN-203ENST00000421914 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
NCSTN-203ENST00000421914 MROH5Q6ZUA9 1318 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 F6X3S4 739 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
NCSTN-203ENST00000421914 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 TRIB2Q92519 343 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
NCSTN-203ENST00000421914 FAM198AQ9UFP1 575 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 GJD2Q9UKL4 321 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
NCSTN-203ENST00000421914 COL2A1P02458 1487 aaPredicted RBP17.03■□□□□ 0.32
NCSTN-203ENST00000421914 COL6A1P12109 1028 aa17.02■□□□□ 0.32
NCSTN-203ENST00000421914 FOSL2P15408 326 aa17.02■□□□□ 0.32
NCSTN-203ENST00000421914 METTL24Q5JXM2 366 aa17.02■□□□□ 0.32
NCSTN-203ENST00000421914 ZSCAN29Q8IWY8 852 aaPredicted RBP17.02■□□□□ 0.32
NCSTN-203ENST00000421914 USP40Q9NVE5 1235 aa17.02■□□□□ 0.32
NCSTN-203ENST00000421914 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
NCSTN-203ENST00000421914 GRM8O00222 908 aa17.01■□□□□ 0.31
NCSTN-203ENST00000421914 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
NCSTN-203ENST00000421914 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
NCSTN-203ENST00000421914 PTPRFP10586 1907 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 SLURP2P0DP57 97 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 BEND3Q5T5X7 828 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 FAM122AQ96E09 287 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 MUC3AQ02505 3323 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 CDH23Q9H251 3354 aa17■□□□□ 0.31
NCSTN-203ENST00000421914 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
NCSTN-203ENST00000421914 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
NCSTN-203ENST00000421914 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
NCSTN-203ENST00000421914 PLA2G5P39877 138 aa16.98■□□□□ 0.31
NCSTN-203ENST00000421914 RGS3P49796 1198 aa16.98■□□□□ 0.31
NCSTN-203ENST00000421914 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
NCSTN-203ENST00000421914 TJAP1Q5JTD0 557 aa16.98■□□□□ 0.31
NCSTN-203ENST00000421914 MAP3K21Q5TCX8 1036 aa16.98■□□□□ 0.31
NCSTN-203ENST00000421914 WDR66Q8TBY9 1149 aa16.98■□□□□ 0.31
NCSTN-203ENST00000421914 SENP6Q9GZR1 1112 aaPredicted RBP16.98■□□□□ 0.31
NCSTN-203ENST00000421914 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
NCSTN-203ENST00000421914 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
NCSTN-203ENST00000421914 CCND3P30281 292 aaPredicted RBP16.97■□□□□ 0.31
NCSTN-203ENST00000421914 CACNB2Q08289 660 aaPredicted RBP16.97■□□□□ 0.31
NCSTN-203ENST00000421914 SHHQ15465 462 aa16.97■□□□□ 0.31
NCSTN-203ENST00000421914 TTYH1Q9H313 450 aaPredicted RBP16.97■□□□□ 0.31
NCSTN-203ENST00000421914 DOCK2Q92608 1830 aa16.97■□□□□ 0.31
NCSTN-203ENST00000421914 ATRNL1Q5VV63 1379 aa16.97■□□□□ 0.31
NCSTN-203ENST00000421914 PDE8BO95263 885 aa16.96■□□□□ 0.31
NCSTN-203ENST00000421914 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.31
NCSTN-203ENST00000421914 PABPC4Q13310 644 aaKnown RBP eCLIP16.96■□□□□ 0.31
NCSTN-203ENST00000421914 SUCLG2Q96I99 432 aa16.96■□□□□ 0.31
NCSTN-203ENST00000421914 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
NCSTN-203ENST00000421914 ASCC2Q9H1I8 757 aaPredicted RBP16.96■□□□□ 0.31
NCSTN-203ENST00000421914 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
NCSTN-203ENST00000421914 PRDX5P30044 214 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms