RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ATRNL1Q5VV63 1379 aa23.38■■□□□ 1.33
GCDH-202ENST00000421816 PPP1R12BO60237 982 aaPredicted RBP23.37■■□□□ 1.33
GCDH-202ENST00000421816 PRKG1Q13976 671 aa23.37■■□□□ 1.33
GCDH-202ENST00000421816 ARMC9Q7Z3E5 817 aa23.37■■□□□ 1.33
GCDH-202ENST00000421816 HOOK2Q96ED9 719 aa23.37■■□□□ 1.33
GCDH-202ENST00000421816 OSBPL5Q9H0X9 879 aaPredicted RBP23.37■■□□□ 1.33
GCDH-202ENST00000421816 FZD1Q9UP38 647 aa23.37■■□□□ 1.33
GCDH-202ENST00000421816 UBE2Q2LH0YL09 131 aa23.36■■□□□ 1.33
GCDH-202ENST00000421816 RNF113AO15541 343 aaKnown RBP23.36■■□□□ 1.33
GCDH-202ENST00000421816 USP2O75604 605 aaPredicted RBP23.36■■□□□ 1.33
GCDH-202ENST00000421816 ZFYP08048 801 aaPredicted RBP23.36■■□□□ 1.33
GCDH-202ENST00000421816 TTLL12Q14166 644 aaPredicted RBP23.36■■□□□ 1.33
GCDH-202ENST00000421816 LDLRAD1Q5T700 205 aa23.36■■□□□ 1.33
GCDH-202ENST00000421816 TGFBRAP1Q8WUH2 860 aa23.36■■□□□ 1.33
GCDH-202ENST00000421816 EVI5LQ96CN4 794 aa23.36■■□□□ 1.33
GCDH-202ENST00000421816 KLRG1Q96E93 195 aa23.36■■□□□ 1.33
GCDH-202ENST00000421816 ANGEL1Q9UNK9 670 aaKnown RBP23.36■■□□□ 1.33
GCDH-202ENST00000421816 OTOFQ9HC10 1997 aa23.36■■□□□ 1.33
GCDH-202ENST00000421816 DDTLA6NHG4 134 aaPredicted RBP23.35■■□□□ 1.33
GCDH-202ENST00000421816 LRRFIP1Q32MZ4 808 aaKnown RBP23.35■■□□□ 1.33
GCDH-202ENST00000421816 CCDC136Q96JN2 1154 aa23.35■■□□□ 1.33
GCDH-202ENST00000421816 FSD1Q9BTV5 496 aa23.35■■□□□ 1.33
GCDH-202ENST00000421816 FLT1P17948 1338 aa23.34■■□□□ 1.33
GCDH-202ENST00000421816 UNCXA6NJT0 531 aa23.34■■□□□ 1.33
GCDH-202ENST00000421816 RGMBQ6NW40 437 aa23.34■■□□□ 1.33
GCDH-202ENST00000421816 MAPKAPK5Q8IW41 473 aa23.34■■□□□ 1.33
GCDH-202ENST00000421816 LCORLQ8N3X6 602 aa23.34■■□□□ 1.33
GCDH-202ENST00000421816 DDX60LQ5H9U9 1706 aaKnown RBP23.33■■□□□ 1.33
GCDH-202ENST00000421816 MYH1P12882 1939 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 IREB2P48200 963 aaKnown RBP23.33■■□□□ 1.33
GCDH-202ENST00000421816 VEGFBP49765 207 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 DCAF15Q66K64 600 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 TICAM2Q86XR7 235 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 ZSCAN29Q8IWY8 852 aaPredicted RBP23.33■■□□□ 1.33
GCDH-202ENST00000421816 APPBP2Q92624 585 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 CSRNP1Q96S65 589 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 PUS7LQ9H0K6 701 aaKnown RBP23.33■■□□□ 1.33
GCDH-202ENST00000421816 ARMT1Q9H993 441 aa23.33■■□□□ 1.33
GCDH-202ENST00000421816 SIPA1L1O43166 1804 aa23.33■■□□□ 1.32
GCDH-202ENST00000421816 MBD4O95243 580 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 MAP3K10Q02779 954 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 CYP4F22Q6NT55 531 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 OSBP2Q969R2 916 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 CAPNS2Q96L46 248 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 CRNKL1Q9BZJ0 848 aaKnown RBP23.32■■□□□ 1.32
GCDH-202ENST00000421816 THSD7BQ9C0I4 1608 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 NAV1Q8NEY1 1877 aa23.32■■□□□ 1.32
GCDH-202ENST00000421816 ECE1P42892 770 aa23.31■■□□□ 1.32
GCDH-202ENST00000421816 USP5P45974 858 aa23.31■■□□□ 1.32
GCDH-202ENST00000421816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.31■■□□□ 1.32
GCDH-202ENST00000421816 DHX36Q9H2U1 1008 aaKnown RBP23.31■■□□□ 1.32
GCDH-202ENST00000421816 CEP350Q5VT06 3117 aa23.31■■□□□ 1.32
GCDH-202ENST00000421816 WDR33Q9C0J8 1336 aaKnown RBP23.31■■□□□ 1.32
GCDH-202ENST00000421816 TRIM6-TRIM34B2RNG4 842 aa23.3■■□□□ 1.32
GCDH-202ENST00000421816 ZNF157P51786 506 aaPredicted RBP23.3■■□□□ 1.32
GCDH-202ENST00000421816 ZMYM1Q5SVZ6 1142 aa23.3■■□□□ 1.32
GCDH-202ENST00000421816 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
GCDH-202ENST00000421816 AIDAQ96BJ3 306 aa23.3■■□□□ 1.32
GCDH-202ENST00000421816 ZNF341Q9BYN7 854 aa23.3■■□□□ 1.32
GCDH-202ENST00000421816 ZNF112Q9UJU3 913 aa23.3■■□□□ 1.32
GCDH-202ENST00000421816 FAM155AB1AL88 458 aaPredicted RBP23.29■■□□□ 1.32
GCDH-202ENST00000421816 TTC22Q5TAA0 569 aa23.29■■□□□ 1.32
GCDH-202ENST00000421816 PAXIP1Q6ZW49 1069 aaPredicted RBP23.29■■□□□ 1.32
GCDH-202ENST00000421816 ANKRD13AQ8IZ07 590 aa23.29■■□□□ 1.32
GCDH-202ENST00000421816 CCDC102AQ96A19 550 aa23.29■■□□□ 1.32
GCDH-202ENST00000421816 PPP4R2Q9NY27 417 aa23.29■■□□□ 1.32
GCDH-202ENST00000421816 TBC1D12O60347 775 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 SLC10A3P09131 477 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 MAP3K9P80192 1104 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.28■■□□□ 1.32
GCDH-202ENST00000421816 RASAL3Q86YV0 1011 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 RILPL2Q969X0 211 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 CLMNQ96JQ2 1002 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 STRBPQ96SI9 672 aaKnown RBP23.28■■□□□ 1.32
GCDH-202ENST00000421816 PALD1Q9ULE6 856 aa23.28■■□□□ 1.32
GCDH-202ENST00000421816 M0R2C6 588 aa23.27■■□□□ 1.32
GCDH-202ENST00000421816 PRKAB2O43741 272 aa23.27■■□□□ 1.32
GCDH-202ENST00000421816 GSPT1P15170 499 aaKnown RBP23.27■■□□□ 1.32
GCDH-202ENST00000421816 METTL16Q86W50 562 aaKnown RBP23.27■■□□□ 1.32
GCDH-202ENST00000421816 SDR42E1Q8WUS8 393 aa23.27■■□□□ 1.32
GCDH-202ENST00000421816 WRNIP1Q96S55 665 aa23.27■■□□□ 1.32
GCDH-202ENST00000421816 DCP1AQ9NPI6 582 aaPredicted RBP23.27■■□□□ 1.32
GCDH-202ENST00000421816 ATP8A2Q9NTI2 1148 aa23.27■■□□□ 1.32
GCDH-202ENST00000421816 PI4KBQ9UBF8 816 aa23.27■■□□□ 1.32
GCDH-202ENST00000421816 SAP30BPQ9UHR5 308 aaKnown RBP23.27■■□□□ 1.32
GCDH-202ENST00000421816 PHF20L1A8MW92 1017 aa23.26■■□□□ 1.31
GCDH-202ENST00000421816 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
GCDH-202ENST00000421816 SEC62Q99442 399 aaKnown RBP23.26■■□□□ 1.31
GCDH-202ENST00000421816 BAZ2AQ9UIF9 1905 aaKnown RBP23.25■■□□□ 1.31
GCDH-202ENST00000421816 LAMB1P07942 1786 aa23.25■■□□□ 1.31
GCDH-202ENST00000421816 GPAA1O43292 621 aa23.25■■□□□ 1.31
GCDH-202ENST00000421816 GRM1Q13255 1194 aa23.25■■□□□ 1.31
GCDH-202ENST00000421816 VGLL4Q14135 290 aa23.25■■□□□ 1.31
GCDH-202ENST00000421816 FOXP4Q8IVH2 680 aaPredicted RBP23.25■■□□□ 1.31
GCDH-202ENST00000421816 SLC10A4Q96EP9 437 aa23.25■■□□□ 1.31
GCDH-202ENST00000421816 HERC5Q9UII4 1024 aaKnown RBP23.25■■□□□ 1.31
GCDH-202ENST00000421816 SLC4A4Q9Y6R1 1079 aa23.25■■□□□ 1.31
GCDH-202ENST00000421816 AOC2O75106 756 aa23.24■■□□□ 1.31
GCDH-202ENST00000421816 INPP5BP32019 993 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms