RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
VARS2-202ENST00000421263 C17orf99Q6UX52 265 aa23.33■■□□□ 1.33
VARS2-202ENST00000421263 SSH3Q8TE77 659 aa23.33■■□□□ 1.33
VARS2-202ENST00000421263 POTEFA5A3E0 1075 aa23.32■■□□□ 1.32
VARS2-202ENST00000421263 CXCL11O14625 94 aa23.32■■□□□ 1.32
VARS2-202ENST00000421263 LACTBP83111 547 aaPredicted RBP23.32■■□□□ 1.32
VARS2-202ENST00000421263 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
VARS2-202ENST00000421263 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
VARS2-202ENST00000421263 NSUN4Q96CB9 384 aaKnown RBP23.32■■□□□ 1.32
VARS2-202ENST00000421263 GPR108Q9NPR9 543 aa23.32■■□□□ 1.32
VARS2-202ENST00000421263 PDHXO00330 501 aa23.31■■□□□ 1.32
VARS2-202ENST00000421263 MAP4K4O95819 1239 aaPredicted RBP23.31■■□□□ 1.32
VARS2-202ENST00000421263 GORABQ5T7V8 394 aa23.31■■□□□ 1.32
VARS2-202ENST00000421263 TBC1D9Q6ZT07 1266 aa23.31■■□□□ 1.32
VARS2-202ENST00000421263 SCYL3Q8IZE3 742 aa23.31■■□□□ 1.32
VARS2-202ENST00000421263 ZBTB7BO15156 539 aaPredicted RBP23.3■■□□□ 1.32
VARS2-202ENST00000421263 SLC34A2O95436 690 aa23.3■■□□□ 1.32
VARS2-202ENST00000421263 LDHCP07864 332 aa23.3■■□□□ 1.32
VARS2-202ENST00000421263 MCAMP43121 646 aa23.3■■□□□ 1.32
VARS2-202ENST00000421263 ARHGAP39Q9C0H5 1083 aa23.3■■□□□ 1.32
VARS2-202ENST00000421263 ADGRA2Q96PE1 1338 aa23.3■■□□□ 1.32
VARS2-202ENST00000421263 DOCK2Q92608 1830 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 TBC1D12O60347 775 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 GNRH1P01148 92 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 UQCRFS1P1P0C7P4 283 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 SLURP2P0DP57 97 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 PTPRAP18433 802 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 GSTO1P78417 241 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 PRPF38BQ5VTL8 546 aaKnown RBP23.29■■□□□ 1.32
VARS2-202ENST00000421263 GPAT2Q6NUI2 795 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
VARS2-202ENST00000421263 ZNF333Q96JL9 665 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 PTCH2Q9Y6C5 1203 aa23.29■■□□□ 1.32
VARS2-202ENST00000421263 RBBP6Q7Z6E9 1792 aaKnown RBP23.29■■□□□ 1.32
VARS2-202ENST00000421263 CTNND1O60716 968 aaKnown RBP23.28■■□□□ 1.32
VARS2-202ENST00000421263 KIF22Q14807 665 aa23.28■■□□□ 1.32
VARS2-202ENST00000421263 TNNI3KQ59H18 835 aa23.28■■□□□ 1.32
VARS2-202ENST00000421263 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
VARS2-202ENST00000421263 AFG3L2Q9Y4W6 797 aa23.28■■□□□ 1.32
VARS2-202ENST00000421263 FPGT-TNNI3KV9GXZ4 949 aa23.28■■□□□ 1.32
VARS2-202ENST00000421263 PICALMQ13492 652 aa23.27■■□□□ 1.32
VARS2-202ENST00000421263 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
VARS2-202ENST00000421263 NBPF11Q86T75 865 aa23.27■■□□□ 1.32
VARS2-202ENST00000421263 CPA4Q9UI42 421 aa23.27■■□□□ 1.32
VARS2-202ENST00000421263 ZHX2Q9Y6X8 837 aa23.27■■□□□ 1.32
VARS2-202ENST00000421263 KIAA0100Q14667 2235 aaKnown RBP23.27■■□□□ 1.31
VARS2-202ENST00000421263 A0A0G2JLL6 359 aaPredicted RBP23.26■■□□□ 1.31
VARS2-202ENST00000421263 RLBP1P12271 317 aa23.26■■□□□ 1.31
VARS2-202ENST00000421263 CTGFP29279 349 aa23.26■■□□□ 1.31
VARS2-202ENST00000421263 PRMT2P55345 433 aa23.26■■□□□ 1.31
VARS2-202ENST00000421263 PRRT2Q7Z6L0 340 aaPredicted RBP23.26■■□□□ 1.31
VARS2-202ENST00000421263 ZNF512BQ96KM6 892 aaPredicted RBP23.26■■□□□ 1.31
VARS2-202ENST00000421263 PICK1Q9NRD5 415 aa23.26■■□□□ 1.31
VARS2-202ENST00000421263 RAI14Q9P0K7 980 aa23.26■■□□□ 1.31
VARS2-202ENST00000421263 BRCA2P51587 3418 aa23.26■■□□□ 1.31
VARS2-202ENST00000421263 MKI67P46013 3256 aaKnown RBP23.26■■□□□ 1.31
VARS2-202ENST00000421263 ZSWIM8A7E2V4 1837 aa23.25■■□□□ 1.31
VARS2-202ENST00000421263 SURF6O75683 361 aaKnown RBP23.25■■□□□ 1.31
VARS2-202ENST00000421263 SLC9C1Q4G0N8 1177 aa23.25■■□□□ 1.31
VARS2-202ENST00000421263 DBNDD2Q9BQY9 259 aa23.25■■□□□ 1.31
VARS2-202ENST00000421263 EN2P19622 333 aaPredicted RBP23.24■■□□□ 1.31
VARS2-202ENST00000421263 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
VARS2-202ENST00000421263 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
VARS2-202ENST00000421263 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
VARS2-202ENST00000421263 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
VARS2-202ENST00000421263 LRP2BPQ9P2M1 347 aa23.24■■□□□ 1.31
VARS2-202ENST00000421263 COL2A1P02458 1487 aaPredicted RBP23.24■■□□□ 1.31
VARS2-202ENST00000421263 IGSF3O75054 1194 aa23.23■■□□□ 1.31
VARS2-202ENST00000421263 BCRP11274 1271 aa23.23■■□□□ 1.31
VARS2-202ENST00000421263 PSMC4P43686 418 aa23.23■■□□□ 1.31
VARS2-202ENST00000421263 TMEM106CQ9BVX2 250 aa23.23■■□□□ 1.31
VARS2-202ENST00000421263 PHIPQ8WWQ0 1821 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 TTC39AQ5SRH9 613 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 TRIM47Q96LD4 638 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 PARK7Q99497 189 aaKnown RBP23.22■■□□□ 1.31
VARS2-202ENST00000421263 OSBPL5Q9H0X9 879 aaPredicted RBP23.22■■□□□ 1.31
VARS2-202ENST00000421263 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 SRRDQ9UH36 339 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 SLC45A1Q9Y2W3 748 aa23.22■■□□□ 1.31
VARS2-202ENST00000421263 CYP2E1P05181 493 aaPredicted RBP23.21■■□□□ 1.31
VARS2-202ENST00000421263 CYP2C8P10632 490 aa23.21■■□□□ 1.31
VARS2-202ENST00000421263 PPP4CP60510 307 aa23.21■■□□□ 1.31
VARS2-202ENST00000421263 OS9Q13438 667 aaPredicted RBP23.21■■□□□ 1.31
VARS2-202ENST00000421263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.21■■□□□ 1.31
VARS2-202ENST00000421263 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
VARS2-202ENST00000421263 DOCK1Q14185 1865 aa23.21■■□□□ 1.31
VARS2-202ENST00000421263 HOXD10P28358 340 aa23.2■■□□□ 1.3
VARS2-202ENST00000421263 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
VARS2-202ENST00000421263 SH3RF3Q8TEJ3 882 aaPredicted RBP23.2■■□□□ 1.3
VARS2-202ENST00000421263 PTPRFP10586 1907 aa23.2■■□□□ 1.3
VARS2-202ENST00000421263 OSBPP22059 807 aa23.19■■□□□ 1.3
VARS2-202ENST00000421263 TEX11Q8IYF3 940 aa23.19■■□□□ 1.3
VARS2-202ENST00000421263 SH3TC2Q8TF17 1288 aa23.19■■□□□ 1.3
VARS2-202ENST00000421263 EAF2Q96CJ1 260 aaPredicted RBP23.19■■□□□ 1.3
VARS2-202ENST00000421263 DBNLQ9UJU6 430 aaKnown RBP23.19■■□□□ 1.3
VARS2-202ENST00000421263 FAM196BA6NMK8 535 aa23.18■■□□□ 1.3
VARS2-202ENST00000421263 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
VARS2-202ENST00000421263 BAG3O95817 575 aa23.18■■□□□ 1.3
VARS2-202ENST00000421263 CEP85Q6P2H3 762 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms