RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TMEM57Q8N5G2 664 aa21.42■■□□□ 1.02
MSH6-203ENST00000420813 SPATA5Q8NB90 893 aa21.42■■□□□ 1.02
MSH6-203ENST00000420813 MAST2Q6P0Q8 1798 aa21.41■■□□□ 1.02
MSH6-203ENST00000420813 PHF20L1A8MW92 1017 aa21.41■■□□□ 1.02
MSH6-203ENST00000420813 NPM3O75607 178 aaKnown RBP21.41■■□□□ 1.02
MSH6-203ENST00000420813 MAP4K4O95819 1239 aaPredicted RBP21.41■■□□□ 1.02
MSH6-203ENST00000420813 GNRH1P01148 92 aa21.41■■□□□ 1.02
MSH6-203ENST00000420813 SH3BP5LQ7L8J4 393 aa21.41■■□□□ 1.02
MSH6-203ENST00000420813 ZSCAN29Q8IWY8 852 aaPredicted RBP21.41■■□□□ 1.02
MSH6-203ENST00000420813 SCYL3Q8IZE3 742 aa21.41■■□□□ 1.02
MSH6-203ENST00000420813 MGAMO43451 1857 aa21.41■■□□□ 1.02
MSH6-203ENST00000420813 POTEFA5A3E0 1075 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 PDHXO00330 501 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 CXCL11O14625 94 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 UQCRFS1P1P0C7P4 283 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 GSTO1P78417 241 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 MOGSQ13724 837 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 C17orf99Q6UX52 265 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 ZNF384Q8TF68 577 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 GPR108Q9NPR9 543 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 DDX4Q9NQI0 724 aaKnown RBP21.4■■□□□ 1.02
MSH6-203ENST00000420813 PTCH2Q9Y6C5 1203 aa21.4■■□□□ 1.02
MSH6-203ENST00000420813 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.02
MSH6-203ENST00000420813 ADGRA2Q96PE1 1338 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 DDTLA6NHG4 134 aaPredicted RBP21.39■■□□□ 1.01
MSH6-203ENST00000420813 LDHCP07864 332 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 PRMT2P55345 433 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 RHBDL3P58872 404 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.011e-6■□□□□ 11
MSH6-203ENST00000420813 POLA2Q14181 598 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 NBPF11Q86T75 865 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 NSUN4Q96CB9 384 aaKnown RBP21.39■■□□□ 1.01
MSH6-203ENST00000420813 ZNF333Q96JL9 665 aa21.39■■□□□ 1.01
MSH6-203ENST00000420813 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.01
MSH6-203ENST00000420813 PICALMQ13492 652 aa21.38■■□□□ 1.01
MSH6-203ENST00000420813 PI16Q6UXB8 463 aa21.38■■□□□ 1.01
MSH6-203ENST00000420813 SSH3Q8TE77 659 aa21.38■■□□□ 1.01
MSH6-203ENST00000420813 PICK1Q9NRD5 415 aa21.38■■□□□ 1.01
MSH6-203ENST00000420813 CDK5RAP2Q96SN8 1893 aa21.38■■□□□ 1.01
MSH6-203ENST00000420813 MYO5AQ9Y4I1 1855 aaKnown RBP21.38■■□□□ 1.01
MSH6-203ENST00000420813 FOCADQ5VW36 1801 aa21.37■■□□□ 1.01
MSH6-203ENST00000420813 PTPRAP18433 802 aa21.37■■□□□ 1.01
MSH6-203ENST00000420813 MCAMP43121 646 aa21.37■■□□□ 1.01
MSH6-203ENST00000420813 ARHGAP39Q9C0H5 1083 aa21.37■■□□□ 1.01
MSH6-203ENST00000420813 MKI67P46013 3256 aaKnown RBP21.37■■□□□ 1.01
MSH6-203ENST00000420813 TBC1D12O60347 775 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 CTNND1O60716 968 aaKnown RBP21.36■■□□□ 1.01
MSH6-203ENST00000420813 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 FASTKD5Q7L8L6 764 aaKnown RBP21.36■■□□□ 1.01
MSH6-203ENST00000420813 FTSJ3Q8IY81 847 aaKnown RBP21.36■■□□□ 1.01
MSH6-203ENST00000420813 PARK7Q99497 189 aaKnown RBP21.36■■□□□ 1.01
MSH6-203ENST00000420813 TMEM106CQ9BVX2 250 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 RAI14Q9P0K7 980 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 CPA4Q9UI42 421 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 ZHX2Q9Y6X8 837 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 BRCA2P51587 3418 aa21.36■■□□□ 1.01
MSH6-203ENST00000420813 A0A0G2JLL6 359 aaPredicted RBP21.35■■□□□ 1.01
MSH6-203ENST00000420813 TNNI3KQ59H18 835 aa21.35■■□□□ 1.01
MSH6-203ENST00000420813 GPAT2Q6NUI2 795 aa21.35■■□□□ 1.01
MSH6-203ENST00000420813 PRRT2Q7Z6L0 340 aaPredicted RBP21.35■■□□□ 1.01
MSH6-203ENST00000420813 MIER1Q8N108 512 aa21.35■■□□□ 1.01
MSH6-203ENST00000420813 AFG3L2Q9Y4W6 797 aa21.35■■□□□ 1.01
MSH6-203ENST00000420813 FPGT-TNNI3KV9GXZ4 949 aa21.35■■□□□ 1.01
MSH6-203ENST00000420813 LRP2BPQ9P2M1 347 aa21.34■■□□□ 1.01
MSH6-203ENST00000420813 SLC45A1Q9Y2W3 748 aa21.34■■□□□ 1.01
MSH6-203ENST00000420813 IGSF3O75054 1194 aa21.33■■□□□ 1.01
MSH6-203ENST00000420813 PSMC4P43686 418 aa21.33■■□□□ 1.01
MSH6-203ENST00000420813 OS9Q13438 667 aaPredicted RBP21.33■■□□□ 1.01
MSH6-203ENST00000420813 CCDC158Q5M9N0 1113 aa21.33■■□□□ 1.01
MSH6-203ENST00000420813 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1.01
MSH6-203ENST00000420813 SIPA1L1O43166 1804 aa21.32■■□□□ 1
MSH6-203ENST00000420813 ZBTB7BO15156 539 aaPredicted RBP21.32■■□□□ 1
MSH6-203ENST00000420813 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
MSH6-203ENST00000420813 BCRP11274 1271 aa21.32■■□□□ 1
MSH6-203ENST00000420813 EN2P19622 333 aaPredicted RBP21.32■■□□□ 1
MSH6-203ENST00000420813 HOXD10P28358 340 aa21.32■■□□□ 1
MSH6-203ENST00000420813 CTGFP29279 349 aa21.32■■□□□ 1
MSH6-203ENST00000420813 TTC39AQ5SRH9 613 aa21.32■■□□□ 1
MSH6-203ENST00000420813 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
MSH6-203ENST00000420813 ZNF512BQ96KM6 892 aaPredicted RBP21.32■■□□□ 1
MSH6-203ENST00000420813 TRIM47Q96LD4 638 aa21.32■■□□□ 1
MSH6-203ENST00000420813 DBNDD2Q9BQY9 259 aa21.32■■□□□ 1
MSH6-203ENST00000420813 OSBPL5Q9H0X9 879 aaPredicted RBP21.32■■□□□ 1
MSH6-203ENST00000420813 SRRDQ9UH36 339 aa21.32■■□□□ 1
MSH6-203ENST00000420813 LOC285556D6RIA3 1793 aa21.32■■□□□ 1
MSH6-203ENST00000420813 SLURP2P0DP57 97 aa21.31■■□□□ 1
MSH6-203ENST00000420813 RLBP1P12271 317 aa21.31■■□□□ 1
MSH6-203ENST00000420813 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
MSH6-203ENST00000420813 TEX11Q8IYF3 940 aa21.31■■□□□ 1
MSH6-203ENST00000420813 NOL10Q9BSC4 688 aaKnown RBP21.31■■□□□ 1
MSH6-203ENST00000420813 C1orf115Q9H7X2 142 aa21.31■■□□□ 1
MSH6-203ENST00000420813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.31■■□□□ 1
MSH6-203ENST00000420813 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
MSH6-203ENST00000420813 CYP2C8P10632 490 aa21.3■■□□□ 1
MSH6-203ENST00000420813 OSBPP22059 807 aa21.3■■□□□ 1
MSH6-203ENST00000420813 NAA16Q6N069 864 aaPredicted RBP21.3■■□□□ 1
MSH6-203ENST00000420813 GADL1Q6ZQY3 521 aa21.3■■□□□ 1
MSH6-203ENST00000420813 SH3TC2Q8TF17 1288 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms