RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CTR9Q6PD62 1173 aa14.9□□□□□ -0.02
TMEM53-206ENST00000420706 USP50Q70EL3 339 aaPredicted RBP14.9□□□□□ -0.02
TMEM53-206ENST00000420706 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
TMEM53-206ENST00000420706 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
TMEM53-206ENST00000420706 RRAGCQ9HB90 399 aa14.9□□□□□ -0.02
TMEM53-206ENST00000420706 TMOD2Q9NZR1 351 aa14.9□□□□□ -0.02
TMEM53-206ENST00000420706 ASTN2O75129 1339 aaPredicted RBP14.9□□□□□ -0.02
TMEM53-206ENST00000420706 FLT1P17948 1338 aa14.9□□□□□ -0.02
TMEM53-206ENST00000420706 FOCADQ5VW36 1801 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 USP17L12C9JPN9 530 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 USP17L21D6R901 530 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 ENTPD3O75355 529 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 TDO2P48775 406 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 SBK1Q52WX2 424 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 ZFPM1Q8IX07 1006 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 KCNB2Q92953 911 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 C22orf23Q9BZE7 217 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 OSBPL5Q9H0X9 879 aaPredicted RBP14.89□□□□□ -0.03
TMEM53-206ENST00000420706 UPF2Q9HAU5 1272 aaKnown RBP14.89□□□□□ -0.03
TMEM53-206ENST00000420706 VEZTQ9HBM0 779 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 MCM9Q9NXL9 1143 aa14.89□□□□□ -0.03
TMEM53-206ENST00000420706 BAZ2AQ9UIF9 1905 aaKnown RBP14.88□□□□□ -0.03
TMEM53-206ENST00000420706 SLC27A2O14975 620 aa14.88□□□□□ -0.03
TMEM53-206ENST00000420706 CYP21A2P08686 494 aa14.88□□□□□ -0.03
TMEM53-206ENST00000420706 TCP10Q12799 353 aa14.88□□□□□ -0.03
TMEM53-206ENST00000420706 ANGEL2Q5VTE6 544 aaKnown RBP14.88□□□□□ -0.03
TMEM53-206ENST00000420706 CREB3L3Q68CJ9 461 aa14.88□□□□□ -0.03
TMEM53-206ENST00000420706 FAM151AQ8WW52 585 aa14.88□□□□□ -0.03
TMEM53-206ENST00000420706 SAP30BPQ9UHR5 308 aaKnown RBP14.88□□□□□ -0.03
TMEM53-206ENST00000420706 CYP2D7A0A087X1C5 515 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 MINDY4BA8MYZ0 360 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 ZNF213O14771 459 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 POLR3DP05423 398 aaPredicted RBP14.87□□□□□ -0.03
TMEM53-206ENST00000420706 CYP2D6P10635 497 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 VEGFAP15692 232 aaPredicted RBP14.87□□□□□ -0.03
TMEM53-206ENST00000420706 MCCP23508 829 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 PPARAQ07869 468 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 IMMTQ16891 758 aaKnown RBP14.87□□□□□ -0.03
TMEM53-206ENST00000420706 C12orf60Q5U649 245 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 SH3BP5LQ7L8J4 393 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 FAM83AQ86UY5 434 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 GPBP1L1Q9HC44 474 aaPredicted RBP14.87□□□□□ -0.03
TMEM53-206ENST00000420706 ARPP21Q9UBL0 812 aaPredicted RBP14.87□□□□□ -0.03
TMEM53-206ENST00000420706 PGAP2Q9UHJ9 254 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 PALD1Q9ULE6 856 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 MYH1P12882 1939 aa14.87□□□□□ -0.03
TMEM53-206ENST00000420706 CNTNAP1P78357 1384 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
TMEM53-206ENST00000420706 SMIM22K7EJ46 135 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 TNNI2P48788 182 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 RBM25P49756 843 aaKnown RBP14.86□□□□□ -0.03
TMEM53-206ENST00000420706 PLCD1P51178 756 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 HAND2P61296 217 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 TSGA10IPQ3SY00 556 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 RNF20Q5VTR2 975 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 TTC6Q86TZ1 520 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 PNMA8AQ86V59 439 aaPredicted RBP14.86□□□□□ -0.03
TMEM53-206ENST00000420706 ZC3H15Q8WU90 426 aaKnown RBP14.86□□□□□ -0.03
TMEM53-206ENST00000420706 ANAPC4Q9UJX5 808 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
TMEM53-206ENST00000420706 NAV1Q8NEY1 1877 aa14.86□□□□□ -0.03
TMEM53-206ENST00000420706 EVX2Q03828 476 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 CTDSPL2Q05D32 466 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 TNFAIP1Q13829 316 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 RASA3Q14644 834 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 EAPPQ56P03 285 aaPredicted RBP14.85□□□□□ -0.03
TMEM53-206ENST00000420706 APOBEC3FQ8IUX4 373 aaKnown RBP14.85□□□□□ -0.03
TMEM53-206ENST00000420706 AMOTL1Q8IY63 956 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 TBC1D32Q96NH3 1257 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 NBPF3Q9H094 633 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 DHX36Q9H2U1 1008 aaKnown RBP14.85□□□□□ -0.03
TMEM53-206ENST00000420706 NMRK2Q9NPI5 230 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 GGA3Q9NZ52 723 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 SNX14Q9Y5W7 946 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 TAF6LQ9Y6J9 622 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 POLR2AP24928 1970 aaKnown RBP14.85□□□□□ -0.03
TMEM53-206ENST00000420706 PITPNM2Q9BZ72 1349 aa14.85□□□□□ -0.03
TMEM53-206ENST00000420706 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
TMEM53-206ENST00000420706 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
TMEM53-206ENST00000420706 SLC4A8Q2Y0W8 1093 aa14.84□□□□□ -0.03
TMEM53-206ENST00000420706 ZSCAN29Q8IWY8 852 aaPredicted RBP14.84□□□□□ -0.03
TMEM53-206ENST00000420706 DCPSQ96C86 337 aaKnown RBP14.84□□□□□ -0.03
TMEM53-206ENST00000420706 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
TMEM53-206ENST00000420706 TMEM39BQ9GZU3 492 aa14.84□□□□□ -0.03
TMEM53-206ENST00000420706 DEFB129Q9H1M3 183 aa14.84□□□□□ -0.03
TMEM53-206ENST00000420706 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
TMEM53-206ENST00000420706 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
TMEM53-206ENST00000420706 COL2A1P02458 1487 aaPredicted RBP14.83□□□□□ -0.03
TMEM53-206ENST00000420706 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 FGRP09769 529 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 ANAPC15P60006 121 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 STOX1Q6ZVD7 989 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 TBC1D10CQ8IV04 446 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 FOXP4Q8IVH2 680 aaPredicted RBP14.83□□□□□ -0.04
TMEM53-206ENST00000420706 STK11IPQ8N1F8 1099 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 DYNLL2Q96FJ2 89 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 TEPSINQ96N21 525 aa14.83□□□□□ -0.04
TMEM53-206ENST00000420706 INCENPQ9NQS7 918 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms