RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 LAMB1P07942 1786 aa20.09■□□□□ 0.81
SEC22C-206ENST00000420163 PPP1R12BO60237 982 aaPredicted RBP20.09■□□□□ 0.81
SEC22C-206ENST00000420163 MAP4K4O95819 1239 aaPredicted RBP20.09■□□□□ 0.81
SEC22C-206ENST00000420163 NUCB1Q02818 461 aa20.09■□□□□ 0.81
SEC22C-206ENST00000420163 RASAL3Q86YV0 1011 aa20.09■□□□□ 0.81
SEC22C-206ENST00000420163 CLMNQ96JQ2 1002 aa20.09■□□□□ 0.81
SEC22C-206ENST00000420163 ZIC5Q96T25 663 aa20.09■□□□□ 0.81
SEC22C-206ENST00000420163 NOL10Q9BSC4 688 aaKnown RBP20.09■□□□□ 0.81
SEC22C-206ENST00000420163 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
SEC22C-206ENST00000420163 DDX60LQ5H9U9 1706 aaKnown RBP20.09■□□□□ 0.81
SEC22C-206ENST00000420163 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
SEC22C-206ENST00000420163 BAG3O95817 575 aa20.08■□□□□ 0.81
SEC22C-206ENST00000420163 SLC10A3P09131 477 aa20.08■□□□□ 0.81
SEC22C-206ENST00000420163 SLURP2P0DP57 97 aa20.08■□□□□ 0.81
SEC22C-206ENST00000420163 CHD1LQ86WJ1 897 aa20.08■□□□□ 0.81
SEC22C-206ENST00000420163 COL2A1P02458 1487 aaPredicted RBP20.07■□□□□ 0.8
SEC22C-206ENST00000420163 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
SEC22C-206ENST00000420163 ADD2P35612 726 aa20.07■□□□□ 0.8
SEC22C-206ENST00000420163 MIGA2Q7L4E1 593 aa20.07■□□□□ 0.8
SEC22C-206ENST00000420163 RIOK1Q9BRS2 568 aaKnown RBP20.07■□□□□ 0.8
SEC22C-206ENST00000420163 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.07■□□□□ 0.8
SEC22C-206ENST00000420163 STAP2Q9UGK3 403 aa20.07■□□□□ 0.8
SEC22C-206ENST00000420163 BAZ2AQ9UIF9 1905 aaKnown RBP20.06■□□□□ 0.8
SEC22C-206ENST00000420163 GLRX3O76003 335 aaKnown RBP20.06■□□□□ 0.8
SEC22C-206ENST00000420163 PLCG2P16885 1265 aa20.06■□□□□ 0.8
SEC22C-206ENST00000420163 IREB2P48200 963 aaKnown RBP20.06■□□□□ 0.8
SEC22C-206ENST00000420163 PDE1AP54750 535 aa20.06■□□□□ 0.8
SEC22C-206ENST00000420163 TMED8Q6PL24 325 aaPredicted RBP20.06■□□□□ 0.8
SEC22C-206ENST00000420163 MAPKAPK5Q8IW41 473 aa20.06■□□□□ 0.8
SEC22C-206ENST00000420163 ZSCAN29Q8IWY8 852 aaPredicted RBP20.06■□□□□ 0.8
SEC22C-206ENST00000420163 CSRNP1Q96S65 589 aa20.06■□□□□ 0.8
SEC22C-206ENST00000420163 OSBPL5Q9H0X9 879 aaPredicted RBP20.06■□□□□ 0.8
SEC22C-206ENST00000420163 FLT1P17948 1338 aa20.05■□□□□ 0.8
SEC22C-206ENST00000420163 ERC2O15083 957 aa20.05■□□□□ 0.8
SEC22C-206ENST00000420163 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.05■□□□□ 0.8
SEC22C-206ENST00000420163 KBTBD3Q8NAB2 608 aa20.05■□□□□ 0.8
SEC22C-206ENST00000420163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEC22C-206ENST00000420163 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
SEC22C-206ENST00000420163 CCDC102AQ96A19 550 aa20.05■□□□□ 0.8
SEC22C-206ENST00000420163 ATAD5Q96QE3 1844 aa20.04■□□□□ 0.8
SEC22C-206ENST00000420163 MAGEB6P1A0A0J9YX57 407 aa20.04■□□□□ 0.8
SEC22C-206ENST00000420163 NOGQ13253 232 aa20.04■□□□□ 0.8
SEC22C-206ENST00000420163 DCAF15Q66K64 600 aa20.04■□□□□ 0.8
SEC22C-206ENST00000420163 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
SEC22C-206ENST00000420163 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.04■□□□□ 0.8
SEC22C-206ENST00000420163 DOCK1Q14185 1865 aa20.04■□□□□ 0.8
SEC22C-206ENST00000420163 MKRN3Q13064 507 aaKnown RBP20.03■□□□□ 0.8
SEC22C-206ENST00000420163 VGLL4Q14135 290 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 UBE3CQ15386 1083 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 PLEKHM2Q8IWE5 1019 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 ANKRD13AQ8IZ07 590 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 HOOK2Q96ED9 719 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 WRNIP1Q96S55 665 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 ZNF341Q9BYN7 854 aa20.03■□□□□ 0.8
SEC22C-206ENST00000420163 FAM196BA6NMK8 535 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 INPP5BP32019 993 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 MAP2K2P36507 400 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 MAP3K9P80192 1104 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 KIF23Q02241 960 aaPredicted RBP20.02■□□□□ 0.8
SEC22C-206ENST00000420163 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 ZKSCAN4Q969J2 545 aaPredicted RBP20.02■□□□□ 0.8
SEC22C-206ENST00000420163 ARMT1Q9H993 441 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 ELP3Q9H9T3 547 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 SAP30BPQ9UHR5 308 aaKnown RBP20.02■□□□□ 0.8
SEC22C-206ENST00000420163 SNCAIPQ9Y6H5 919 aa20.02■□□□□ 0.8
SEC22C-206ENST00000420163 MBD4O95243 580 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 HSPA1AP0DMV8 641 aaKnown RBP20.01■□□□□ 0.79
SEC22C-206ENST00000420163 HSPA1BP0DMV9 641 aaKnown RBP20.01■□□□□ 0.79
SEC22C-206ENST00000420163 PDE4AP27815 886 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 GJA5P36382 358 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 SPRYD7Q5W111 196 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 ZSCAN25Q6NSZ9 544 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 SLC10A4Q96EP9 437 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 ZNF112Q9UJU3 913 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 PHIPQ8WWQ0 1821 aa20.01■□□□□ 0.79
SEC22C-206ENST00000420163 UNCXA6NJT0 531 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 MAP3K10Q02779 954 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 SLC4A8Q2Y0W8 1093 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 CERS3Q8IU89 383 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 WNK4Q96J92 1243 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 PUS7LQ9H0K6 701 aaKnown RBP20■□□□□ 0.79
SEC22C-206ENST00000420163 WBP1LQ9NX94 342 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 PALD1Q9ULE6 856 aa20■□□□□ 0.79
SEC22C-206ENST00000420163 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
SEC22C-206ENST00000420163 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
SEC22C-206ENST00000420163 PRKAB2O43741 272 aa19.99■□□□□ 0.79
SEC22C-206ENST00000420163 USP5P45974 858 aa19.99■□□□□ 0.79
SEC22C-206ENST00000420163 SDR42E1Q8WUS8 393 aa19.99■□□□□ 0.79
SEC22C-206ENST00000420163 FSD1Q9BTV5 496 aa19.99■□□□□ 0.79
SEC22C-206ENST00000420163 CSADQ9Y600 493 aa19.99■□□□□ 0.79
SEC22C-206ENST00000420163 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
SEC22C-206ENST00000420163 OSBP2Q969R2 916 aa19.98■□□□□ 0.79
SEC22C-206ENST00000420163 OPTNQ96CV9 577 aa19.98■□□□□ 0.79
SEC22C-206ENST00000420163 CRNKL1Q9BZJ0 848 aaKnown RBP19.98■□□□□ 0.79
SEC22C-206ENST00000420163 OSBPL3Q9H4L5 887 aa19.98■□□□□ 0.79
SEC22C-206ENST00000420163 PTPRFP10586 1907 aa19.98■□□□□ 0.79
SEC22C-206ENST00000420163 MYH8P13535 1937 aa19.98■□□□□ 0.79
SEC22C-206ENST00000420163 MAP2K1Q02750 393 aaPredicted RBP19.97■□□□□ 0.79
SEC22C-206ENST00000420163 EVX2Q03828 476 aa19.97■□□□□ 0.79
SEC22C-206ENST00000420163 APPBP2Q92624 585 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms