RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 BTDP43251 543 aa21.35■■□□□ 1.01
PTCD1-202ENST00000419981 GORABQ5T7V8 394 aa21.35■■□□□ 1.01
PTCD1-202ENST00000419981 ZNF333Q96JL9 665 aa21.35■■□□□ 1.01
PTCD1-202ENST00000419981 ARHGAP39Q9C0H5 1083 aa21.35■■□□□ 1.01
PTCD1-202ENST00000419981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.35■■□□□ 1.01
PTCD1-202ENST00000419981 LOC285556D6RIA3 1793 aa21.35■■□□□ 1.01
PTCD1-202ENST00000419981 SIPA1L1O43166 1804 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 PNMA6EA0A0J9YXQ4 647 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 PDHXO00330 501 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 GNRH1P01148 92 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 MECOMQ03112 1051 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 G3BP1Q13283 466 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTCD1-202ENST00000419981 PICALMQ13492 652 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 TMEM106CQ9BVX2 250 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 DOCK3Q8IZD9 2030 aa21.34■■□□□ 1.01
PTCD1-202ENST00000419981 MYH1P12882 1939 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 PHF20L1A8MW92 1017 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 C17orf99Q6UX52 265 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 SH3BP5LQ7L8J4 393 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 SCYL3Q8IZE3 742 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 DDX4Q9NQI0 724 aaKnown RBP21.33■■□□□ 1.01
PTCD1-202ENST00000419981 PICK1Q9NRD5 415 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 HMG20BQ9P0W2 317 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 CPA4Q9UI42 421 aa21.33■■□□□ 1.01
PTCD1-202ENST00000419981 ADGRA2Q96PE1 1338 aa21.32■■□□□ 1
PTCD1-202ENST00000419981 DDTLA6NHG4 134 aaPredicted RBP21.32■■□□□ 1
PTCD1-202ENST00000419981 CXCL11O14625 94 aa21.32■■□□□ 1
PTCD1-202ENST00000419981 ARID4AP29374 1257 aaPredicted RBP21.32■■□□□ 1
PTCD1-202ENST00000419981 MOGSQ13724 837 aa21.32■■□□□ 1
PTCD1-202ENST00000419981 ZKSCAN2Q63HK3 967 aa21.32■■□□□ 1
PTCD1-202ENST00000419981 TMEM57Q8N5G2 664 aa21.32■■□□□ 1
PTCD1-202ENST00000419981 SPATA5Q8NB90 893 aa21.32■■□□□ 1
PTCD1-202ENST00000419981 GPR75-ASB3A0A0A6YYF3 556 aa21.31■■□□□ 1
PTCD1-202ENST00000419981 EN2P19622 333 aaPredicted RBP21.31■■□□□ 1
PTCD1-202ENST00000419981 PRMT2P55345 433 aa21.31■■□□□ 1
PTCD1-202ENST00000419981 GSTO1P78417 241 aa21.31■■□□□ 1
PTCD1-202ENST00000419981 PI16Q6UXB8 463 aa21.31■■□□□ 1
PTCD1-202ENST00000419981 PARK7Q99497 189 aaKnown RBP21.31■■□□□ 1
PTCD1-202ENST00000419981 BRCA2P51587 3418 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 ECM2O94769 699 aaPredicted RBP21.3■■□□□ 1
PTCD1-202ENST00000419981 LDHCP07864 332 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 PTPRAP18433 802 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 MAP3K10Q02779 954 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 SLC4A8Q2Y0W8 1093 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 ZNF384Q8TF68 577 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 ZHX2Q9Y6X8 837 aa21.3■■□□□ 1
PTCD1-202ENST00000419981 COL2A1P02458 1487 aaPredicted RBP21.3■■□□□ 1
PTCD1-202ENST00000419981 UQCRFS1P1P0C7P4 283 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 MCAMP43121 646 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 PSMC4P43686 418 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 RHBDL3P58872 404 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 TBC1D9Q6ZT07 1266 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 FASTKD5Q7L8L6 764 aaKnown RBP21.29■■□□□ 1
PTCD1-202ENST00000419981 SH3TC2Q8TF17 1288 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 NSUN4Q96CB9 384 aaKnown RBP21.29■■□□□ 1
PTCD1-202ENST00000419981 RAI14Q9P0K7 980 aa21.29■■□□□ 1
PTCD1-202ENST00000419981 MKI67P46013 3256 aaKnown RBP21.29■■□□□ 1
PTCD1-202ENST00000419981 A0A0G2JLL6 359 aaPredicted RBP21.28■■□□□ 1
PTCD1-202ENST00000419981 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
PTCD1-202ENST00000419981 NPM3O75607 178 aaKnown RBP21.28■■□□□ 1
PTCD1-202ENST00000419981 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
PTCD1-202ENST00000419981 GPAT2Q6NUI2 795 aa21.28■■□□□ 1
PTCD1-202ENST00000419981 PRRT2Q7Z6L0 340 aaPredicted RBP21.28■■□□□ 1
PTCD1-202ENST00000419981 AFG3L2Q9Y4W6 797 aa21.28■■□□□ 1
PTCD1-202ENST00000419981 SLURP2P0DP57 97 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 HOXD10P28358 340 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 CTGFP29279 349 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 HNRNPUQ00839 825 aaKnown RBP eCLIP21.27■■□□□ 1
PTCD1-202ENST00000419981 POLA2Q14181 598 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 GADL1Q6ZQY3 521 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 TRIM47Q96LD4 638 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 SRRDQ9UH36 339 aa21.27■■□□□ 1
PTCD1-202ENST00000419981 FMNL1O95466 1100 aaPredicted RBP21.26■□□□□ 0.99
PTCD1-202ENST00000419981 MYCP01106 439 aaPredicted RBP21.26■□□□□ 0.99
PTCD1-202ENST00000419981 CYP2C8P10632 490 aa21.26■□□□□ 0.99
PTCD1-202ENST00000419981 OSBPP22059 807 aa21.26■□□□□ 0.99
PTCD1-202ENST00000419981 OS9Q13438 667 aaPredicted RBP21.26■□□□□ 0.99
PTCD1-202ENST00000419981 GPR108Q9NPR9 543 aa21.26■□□□□ 0.99
PTCD1-202ENST00000419981 LRP2BPQ9P2M1 347 aa21.26■□□□□ 0.99
PTCD1-202ENST00000419981 TBC1D12O60347 775 aa21.25■□□□□ 0.99
PTCD1-202ENST00000419981 BCRP11274 1271 aa21.25■□□□□ 0.99
PTCD1-202ENST00000419981 TTC39AQ5SRH9 613 aa21.25■□□□□ 0.99
PTCD1-202ENST00000419981 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
PTCD1-202ENST00000419981 SSH3Q8TE77 659 aa21.25■□□□□ 0.99
PTCD1-202ENST00000419981 NOL10Q9BSC4 688 aaKnown RBP21.25■□□□□ 0.99
PTCD1-202ENST00000419981 OSBPL5Q9H0X9 879 aaPredicted RBP21.25■□□□□ 0.99
PTCD1-202ENST00000419981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.25■□□□□ 0.99
PTCD1-202ENST00000419981 MYPNQ86TC9 1320 aa21.25■□□□□ 0.99
PTCD1-202ENST00000419981 ATP8B2P98198 1209 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 TNNI3KQ59H18 835 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 CCDC158Q5M9N0 1113 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 RAET1EQ8TD07 263 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 GCC1Q96CN9 775 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.24■□□□□ 0.99
PTCD1-202ENST00000419981 SLC45A1Q9Y2W3 748 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 FPGT-TNNI3KV9GXZ4 949 aa21.24■□□□□ 0.99
PTCD1-202ENST00000419981 TRIM75PA6NK02 468 aa21.23■□□□□ 0.99
PTCD1-202ENST00000419981 FAM196BA6NMK8 535 aa21.23■□□□□ 0.99
PTCD1-202ENST00000419981 FCGRTP55899 365 aa21.23■□□□□ 0.99
PTCD1-202ENST00000419981 ITPRIPQ8IWB1 547 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms