RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PPP4CP60510 307 aa25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 MIGA2Q7L4E1 593 aa25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 ZKSCAN4Q969J2 545 aaPredicted RBP25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 MS4A4AQ96JQ5 239 aa25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 CASP8AP2Q9UKL3 1982 aa25.2■■□□□ 1.63
PKNOX1-202ENST00000418336 PHF20L1A8MW92 1017 aa25.2■■□□□ 1.62
PKNOX1-202ENST00000418336 MAP4K4O95819 1239 aaPredicted RBP25.2■■□□□ 1.62
PKNOX1-202ENST00000418336 SH3RF3Q8TEJ3 882 aaPredicted RBP25.2■■□□□ 1.62
PKNOX1-202ENST00000418336 OPTNQ96CV9 577 aa25.2■■□□□ 1.62
PKNOX1-202ENST00000418336 WRNIP1Q96S55 665 aa25.2■■□□□ 1.62
PKNOX1-202ENST00000418336 CFHR5Q9BXR6 569 aa25.2■■□□□ 1.62
PKNOX1-202ENST00000418336 SPDYE5A6NIY4 337 aa25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 IGF2BP3O00425 579 aaKnown RBP eCLIP25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 SMARCA5O60264 1052 aaPredicted RBP25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 INPP5BP32019 993 aa25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 NAA16Q6N069 864 aaPredicted RBP25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 HOOK2Q96ED9 719 aa25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 PTPN18Q99952 460 aa25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 ZNF341Q9BYN7 854 aa25.19■■□□□ 1.62
PKNOX1-202ENST00000418336 PICALMQ13492 652 aa25.18■■□□□ 1.62
PKNOX1-202ENST00000418336 DCAF15Q66K64 600 aa25.18■■□□□ 1.62
PKNOX1-202ENST00000418336 LRRCC1Q9C099 1032 aa25.18■■□□□ 1.62
PKNOX1-202ENST00000418336 R3HDMLQ9H3Y0 253 aa25.18■■□□□ 1.62
PKNOX1-202ENST00000418336 MANSC4A6NHS7 340 aaPredicted RBP25.17■■□□□ 1.62
PKNOX1-202ENST00000418336 SREBF2Q12772 1141 aa25.17■■□□□ 1.62
PKNOX1-202ENST00000418336 NOL9Q5SY16 702 aaKnown RBP25.17■■□□□ 1.62
PKNOX1-202ENST00000418336 TNS4Q8IZW8 715 aa25.17■■□□□ 1.62
PKNOX1-202ENST00000418336 AATFQ9NY61 560 aaKnown RBP eCLIP25.17■■□□□ 1.62
PKNOX1-202ENST00000418336 AK9Q5TCS8 1911 aa25.17■■□□□ 1.62
PKNOX1-202ENST00000418336 IFIT2P09913 472 aaKnown RBP25.16■■□□□ 1.62
PKNOX1-202ENST00000418336 ATP5JP18859 108 aa25.16■■□□□ 1.62
PKNOX1-202ENST00000418336 IFNL1Q8IU54 200 aa25.16■■□□□ 1.62
PKNOX1-202ENST00000418336 OSBPL5Q9H0X9 879 aaPredicted RBP25.16■■□□□ 1.62
PKNOX1-202ENST00000418336 DYNLL1P63167 89 aaKnown RBP25.15■■□□□ 1.62
PKNOX1-202ENST00000418336 EDC3Q96F86 508 aaKnown RBP25.15■■□□□ 1.62
PKNOX1-202ENST00000418336 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.15■■□□□ 1.62
PKNOX1-202ENST00000418336 TCRBV5S4A2TA0A5A2 114 aa25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 IDH1O75874 414 aaKnown RBP25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 TBC1D8O95759 1140 aa25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 INHBEP58166 350 aa25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 TEX11Q8IYF3 940 aa25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 BRI3BPQ8WY22 251 aa25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 CSADQ9Y600 493 aa25.14■■□□□ 1.62
PKNOX1-202ENST00000418336 DDX60LQ5H9U9 1706 aaKnown RBP25.13■■□□□ 1.61
PKNOX1-202ENST00000418336 TBC1D12O60347 775 aa25.13■■□□□ 1.61
PKNOX1-202ENST00000418336 ERO1BQ86YB8 467 aa25.13■■□□□ 1.61
PKNOX1-202ENST00000418336 MAGEB6Q8N7X4 407 aa25.13■■□□□ 1.61
PKNOX1-202ENST00000418336 OTUD5Q96G74 571 aa25.13■■□□□ 1.61
PKNOX1-202ENST00000418336 PHIPQ8WWQ0 1821 aa25.13■■□□□ 1.61
PKNOX1-202ENST00000418336 FLT1P17948 1338 aa25.12■■□□□ 1.61
PKNOX1-202ENST00000418336 CYP7A1P22680 504 aa25.12■■□□□ 1.61
PKNOX1-202ENST00000418336 NOM1Q5C9Z4 860 aaKnown RBP25.12■■□□□ 1.61
PKNOX1-202ENST00000418336 HAUS7Q99871 368 aa25.12■■□□□ 1.61
PKNOX1-202ENST00000418336 RIOK1Q9BRS2 568 aaKnown RBP25.12■■□□□ 1.61
PKNOX1-202ENST00000418336 IRF6O14896 467 aa25.11■■□□□ 1.61
PKNOX1-202ENST00000418336 PPIL2Q13356 520 aa25.11■■□□□ 1.61
PKNOX1-202ENST00000418336 RRP1BQ14684 758 aaKnown RBP25.11■■□□□ 1.61
PKNOX1-202ENST00000418336 TMED8Q6PL24 325 aaPredicted RBP25.11■■□□□ 1.61
PKNOX1-202ENST00000418336 BOLA2Q9H3K6 86 aa25.11■■□□□ 1.61
PKNOX1-202ENST00000418336 DOCK1Q14185 1865 aa25.11■■□□□ 1.61
PKNOX1-202ENST00000418336 GOLIM4O00461 696 aa25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 BAG3O95817 575 aa25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 PDE6AP16499 860 aa25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 PPATQ06203 517 aa25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 MOGSQ13724 837 aa25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 TTF1Q15361 905 aaPredicted RBP25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 METTL16Q86W50 562 aaKnown RBP25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 DNAJC2Q99543 621 aaKnown RBP25.1■■□□□ 1.61
PKNOX1-202ENST00000418336 FAM196BA6NMK8 535 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 MAP3K12Q12852 859 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 MAPKAPK5Q8IW41 473 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 MIGA1Q8NAN2 632 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 TGFBRAP1Q8WUH2 860 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 DNAJC18Q9H819 358 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 KCNH4Q9UQ05 1017 aa25.09■■□□□ 1.61
PKNOX1-202ENST00000418336 CHGBP05060 677 aa25.08■■□□□ 1.61
PKNOX1-202ENST00000418336 PLCG2P16885 1265 aa25.08■■□□□ 1.61
PKNOX1-202ENST00000418336 HDAC1Q13547 482 aaPredicted RBP25.08■■□□□ 1.61
PKNOX1-202ENST00000418336 SLFNL1Q499Z3 407 aa25.08■■□□□ 1.61
PKNOX1-202ENST00000418336 ZSCAN29Q8IWY8 852 aaPredicted RBP25.08■■□□□ 1.61
PKNOX1-202ENST00000418336 PAG1Q9NWQ8 432 aa25.08■■□□□ 1.61
PKNOX1-202ENST00000418336 SALL3Q9BXA9 1300 aa25.08■■□□□ 1.6
PKNOX1-202ENST00000418336 ALDH1A1P00352 501 aa25.07■■□□□ 1.6
PKNOX1-202ENST00000418336 GTF2A2P52657 109 aa25.07■■□□□ 1.6
PKNOX1-202ENST00000418336 SCYL3Q8IZE3 742 aa25.07■■□□□ 1.6
PKNOX1-202ENST00000418336 FAM43AQ8N2R8 423 aa25.07■■□□□ 1.6
PKNOX1-202ENST00000418336 ZNF296Q8WUU4 475 aaPredicted RBP25.07■■□□□ 1.6
PKNOX1-202ENST00000418336 BCL11AQ9H165 835 aa25.07■■□□□ 1.6
PKNOX1-202ENST00000418336 CCL15-CCL14A0A0B4J2E2 113 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 GPR25O00155 361 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 CCL15Q16663 113 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 SLC9C2Q5TAH2 1124 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 OTUD7AQ8TE49 926 aaPredicted RBP25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 ECHDC1Q9NTX5 307 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 ZNF532Q9HCE3 1301 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 PTPRFP10586 1907 aa25.06■■□□□ 1.6
PKNOX1-202ENST00000418336 PTPRAP18433 802 aa25.05■■□□□ 1.6
PKNOX1-202ENST00000418336 ADD2P35612 726 aa25.05■■□□□ 1.6
PKNOX1-202ENST00000418336 TSHZ3Q63HK5 1081 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms