RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 RGMBQ6NW40 437 aa23.34■■□□□ 1.33
SLC39A1-206ENST00000417348 OSBPL5Q9H0X9 879 aaPredicted RBP23.34■■□□□ 1.33
SLC39A1-206ENST00000417348 DLK2Q6UY11 383 aa23.33■■□□□ 1.33
SLC39A1-206ENST00000417348 ANKRD13AQ8IZ07 590 aa23.33■■□□□ 1.33
SLC39A1-206ENST00000417348 EDC3Q96F86 508 aaKnown RBP23.33■■□□□ 1.33
SLC39A1-206ENST00000417348 MAGEB6P1A0A0J9YX57 407 aa23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 RNF113AO15541 343 aaKnown RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 PRAMEF18Q5VWM3 479 aa23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 METTL16Q86W50 562 aaKnown RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 SH3RF3Q8TEJ3 882 aaPredicted RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 APPBP2Q92624 585 aa23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 CRNKL1Q9BZJ0 848 aaKnown RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 BCL11AQ9H165 835 aa23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 DDX4Q9NQI0 724 aaKnown RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 ZNF112Q9UJU3 913 aa23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 SCAF8Q9UPN6 1271 aaKnown RBP23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 CDK5RAP2Q96SN8 1893 aa23.32■■□□□ 1.32
SLC39A1-206ENST00000417348 NOGQ13253 232 aa23.31■■□□□ 1.32
SLC39A1-206ENST00000417348 ZNF341Q9BYN7 854 aa23.31■■□□□ 1.32
SLC39A1-206ENST00000417348 ATP8A2Q9NTI2 1148 aa23.31■■□□□ 1.32
SLC39A1-206ENST00000417348 PI4KBQ9UBF8 816 aa23.31■■□□□ 1.32
SLC39A1-206ENST00000417348 HERC5Q9UII4 1024 aaKnown RBP23.31■■□□□ 1.32
SLC39A1-206ENST00000417348 FLT1P17948 1338 aa23.31■■□□□ 1.32
SLC39A1-206ENST00000417348 TCP10Q12799 353 aa23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 TSHZ3Q63HK5 1081 aa23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 CAPNS2Q96L46 248 aa23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 CSRNP1Q96S65 589 aa23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 ANGEL1Q9UNK9 670 aaKnown RBP23.3■■□□□ 1.32
SLC39A1-206ENST00000417348 SLC10A3P09131 477 aa23.29■■□□□ 1.32
SLC39A1-206ENST00000417348 TTLL12Q14166 644 aaPredicted RBP23.29■■□□□ 1.32
SLC39A1-206ENST00000417348 FOXP4Q8IVH2 680 aaPredicted RBP23.29■■□□□ 1.32
SLC39A1-206ENST00000417348 LAMB1P07942 1786 aa23.29■■□□□ 1.32
SLC39A1-206ENST00000417348 WDR33Q9C0J8 1336 aaKnown RBP23.29■■□□□ 1.32
SLC39A1-206ENST00000417348 ZBTB48P10074 688 aaPredicted RBP23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 GNAT2P19087 354 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 VEGFBP49765 207 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 MAP3K9P80192 1104 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 HTRA3P83110 453 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 SH3BP5LQ7L8J4 393 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 TGFBRAP1Q8WUH2 860 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 EHD4Q9H223 541 aa23.28■■□□□ 1.32
SLC39A1-206ENST00000417348 FAM155AB1AL88 458 aaPredicted RBP23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 ZNF157P51786 506 aaPredicted RBP23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 PICALMQ13492 652 aa23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 NOL9Q5SY16 702 aaKnown RBP23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 AIDAQ96BJ3 306 aa23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 GINM1Q9NU53 330 aa23.27■■□□□ 1.32
SLC39A1-206ENST00000417348 AK9Q5TCS8 1911 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 DDTLA6NHG4 134 aaPredicted RBP23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 UBE2Q2LH0YL09 131 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 USP5P45974 858 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 DYNLL1P63167 89 aaKnown RBP23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 TTC6Q86TZ1 520 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 ZSCAN29Q8IWY8 852 aaPredicted RBP23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 CDAN1Q8IWY9 1227 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 ZFPM1Q8IX07 1006 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 CSADQ9Y600 493 aa23.26■■□□□ 1.31
SLC39A1-206ENST00000417348 DDX60LQ5H9U9 1706 aaKnown RBP23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 HIP1O00291 1037 aa23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 HLA-DOAP06340 250 aa23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 ZMYM1Q5SVZ6 1142 aa23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 RASAL3Q86YV0 1011 aa23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 DDRGK1Q96HY6 314 aa23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 CCDC136Q96JN2 1154 aa23.25■■□□□ 1.31
SLC39A1-206ENST00000417348 INHBEP58166 350 aa23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 MAP2K1Q02750 393 aaPredicted RBP23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 LCORLQ8N3X6 602 aa23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 SLC10A4Q96EP9 437 aa23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 STRBPQ96SI9 672 aaKnown RBP23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 TBC1D2Q9BYX2 928 aa23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 PUS7LQ9H0K6 701 aaKnown RBP23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
SLC39A1-206ENST00000417348 PHF20L1A8MW92 1017 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 CTNND1O60716 968 aaKnown RBP23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 MBD4O95243 580 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 PDE4AP27815 886 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 CYP4F22Q6NT55 531 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 MAPKAPK5Q8IW41 473 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 OSBP2Q969R2 916 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 WRNIP1Q96S55 665 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 DCP1AQ9NPI6 582 aaPredicted RBP23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 OTOFQ9HC10 1997 aa23.23■■□□□ 1.31
SLC39A1-206ENST00000417348 MYH1P12882 1939 aa23.22■■□□□ 1.31
SLC39A1-206ENST00000417348 MOB2Q70IA6 237 aa23.22■■□□□ 1.31
SLC39A1-206ENST00000417348 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
SLC39A1-206ENST00000417348 SPDYE5A6NIY4 337 aa23.21■■□□□ 1.31
SLC39A1-206ENST00000417348 CA12O43570 354 aa23.21■■□□□ 1.31
SLC39A1-206ENST00000417348 VGLL4Q14135 290 aa23.21■■□□□ 1.31
SLC39A1-206ENST00000417348 TTC22Q5TAA0 569 aa23.21■■□□□ 1.31
SLC39A1-206ENST00000417348 SPRYD7Q5W111 196 aa23.21■■□□□ 1.31
SLC39A1-206ENST00000417348 ERO1BQ86YB8 467 aa23.21■■□□□ 1.31
SLC39A1-206ENST00000417348 NAV1Q8NEY1 1877 aa23.2■■□□□ 1.3
SLC39A1-206ENST00000417348 TRIM6-TRIM34B2RNG4 842 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms