RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 DDTLA6NHG4 134 aaPredicted RBP18.34■□□□□ 0.53
RPS28-201ENST00000417088 BTDP43251 543 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 MAP3K10Q02779 954 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 SLC4A8Q2Y0W8 1093 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 GPAT2Q6NUI2 795 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 ZSCAN29Q8IWY8 852 aaPredicted RBP18.34■□□□□ 0.53
RPS28-201ENST00000417088 SCYL3Q8IZE3 742 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
RPS28-201ENST00000417088 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.53
RPS28-201ENST00000417088 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.52
RPS28-201ENST00000417088 MYCP01106 439 aaPredicted RBP18.33■□□□□ 0.52
RPS28-201ENST00000417088 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 TRIM27P14373 513 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 PSMC4P43686 418 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 MECOMQ03112 1051 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 NEUROD6Q96NK8 337 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 HMG20BQ9P0W2 317 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 ZHX2Q9Y6X8 837 aa18.33■□□□□ 0.52
RPS28-201ENST00000417088 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 BCAR3O75815 825 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 GNAI2P04899 355 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 PTPRAP18433 802 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 RHBDL3P58872 404 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 PICALMQ13492 652 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 ATF7IPQ6VMQ6 1270 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 PICK1Q9NRD5 415 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 SRRDQ9UH36 339 aa18.32■□□□□ 0.52
RPS28-201ENST00000417088 A0A0G2JLL6 359 aaPredicted RBP18.31■□□□□ 0.52
RPS28-201ENST00000417088 PNMA6EA0A0J9YXQ4 647 aa18.31■□□□□ 0.52
RPS28-201ENST00000417088 FMNL1O95466 1100 aaPredicted RBP18.31■□□□□ 0.52
RPS28-201ENST00000417088 CYP2C8P10632 490 aa18.31■□□□□ 0.52
RPS28-201ENST00000417088 OSBPP22059 807 aa18.31■□□□□ 0.52
RPS28-201ENST00000417088 PRRT2Q7Z6L0 340 aaPredicted RBP18.31■□□□□ 0.52
RPS28-201ENST00000417088 FRAT1Q92837 279 aaPredicted RBP18.31■□□□□ 0.52
RPS28-201ENST00000417088 PARK7Q99497 189 aaKnown RBP18.31■□□□□ 0.52
RPS28-201ENST00000417088 AFG3L2Q9Y4W6 797 aa18.31■□□□□ 0.52
RPS28-201ENST00000417088 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
RPS28-201ENST00000417088 BCRP11274 1271 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 HOXD10P28358 340 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 PI16Q6UXB8 463 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 TBC1D9Q6ZT07 1266 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 FASTKD5Q7L8L6 764 aaKnown RBP18.3■□□□□ 0.52
RPS28-201ENST00000417088 SPATA5Q8NB90 893 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
RPS28-201ENST00000417088 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
RPS28-201ENST00000417088 ARID4AP29374 1257 aaPredicted RBP18.29■□□□□ 0.52
RPS28-201ENST00000417088 G3BP1Q13283 466 aaKnown RBP eCLIP18.29■□□□□ 0.52
RPS28-201ENST00000417088 NSUN4Q96CB9 384 aaKnown RBP18.29■□□□□ 0.52
RPS28-201ENST00000417088 TBC1D12O60347 775 aa18.28■□□□□ 0.52
RPS28-201ENST00000417088 LDHCP07864 332 aa18.28■□□□□ 0.52
RPS28-201ENST00000417088 MTFR1Q15390 333 aa18.28■□□□□ 0.52
RPS28-201ENST00000417088 HABP4Q5JVS0 413 aaKnown RBP18.28■□□□□ 0.52
RPS28-201ENST00000417088 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
RPS28-201ENST00000417088 RAET1EQ8TD07 263 aa18.28■□□□□ 0.52
RPS28-201ENST00000417088 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
RPS28-201ENST00000417088 MYPNQ86TC9 1320 aa18.27■□□□□ 0.52
RPS28-201ENST00000417088 GRK4P32298 578 aa18.27■□□□□ 0.52
RPS28-201ENST00000417088 GSTO1P78417 241 aa18.27■□□□□ 0.52
RPS28-201ENST00000417088 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
RPS28-201ENST00000417088 RAI14Q9P0K7 980 aa18.27■□□□□ 0.52
RPS28-201ENST00000417088 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
RPS28-201ENST00000417088 TRIM75PA6NK02 468 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
RPS28-201ENST00000417088 UQCRFS1P1P0C7P4 283 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 MCAMP43121 646 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 FCGRTP55899 365 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 PRKCZQ05513 592 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
RPS28-201ENST00000417088 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
RPS28-201ENST00000417088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
RPS28-201ENST00000417088 GABRQQ9UN88 632 aa18.25■□□□□ 0.51
RPS28-201ENST00000417088 CEP290O15078 2479 aa18.25■□□□□ 0.51
RPS28-201ENST00000417088 DOCK1Q14185 1865 aa18.24■□□□□ 0.51
RPS28-201ENST00000417088 POLA2Q14181 598 aa18.24■□□□□ 0.51
RPS28-201ENST00000417088 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
RPS28-201ENST00000417088 OSBPL5Q9H0X9 879 aaPredicted RBP18.24■□□□□ 0.51
RPS28-201ENST00000417088 GPR108Q9NPR9 543 aa18.24■□□□□ 0.51
RPS28-201ENST00000417088 LRP2BPQ9P2M1 347 aa18.24■□□□□ 0.51
RPS28-201ENST00000417088 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
RPS28-201ENST00000417088 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
RPS28-201ENST00000417088 CCL5P13501 91 aa18.23■□□□□ 0.51
RPS28-201ENST00000417088 TEX11Q8IYF3 940 aa18.23■□□□□ 0.51
RPS28-201ENST00000417088 SNRKQ9NRH2 765 aa18.23■□□□□ 0.51
RPS28-201ENST00000417088 AGTPBP1Q9UPW5 1226 aa18.23■□□□□ 0.51
RPS28-201ENST00000417088 PTPRFP10586 1907 aa18.23■□□□□ 0.51
RPS28-201ENST00000417088 GJB1P08034 283 aa18.22■□□□□ 0.51
RPS28-201ENST00000417088 GJA8P48165 433 aa18.22■□□□□ 0.51
RPS28-201ENST00000417088 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
RPS28-201ENST00000417088 RRP1BQ14684 758 aaKnown RBP18.22■□□□□ 0.51
RPS28-201ENST00000417088 TNNI3KQ59H18 835 aa18.22■□□□□ 0.51
RPS28-201ENST00000417088 TREML2Q5T2D2 321 aa18.22■□□□□ 0.51
RPS28-201ENST00000417088 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
RPS28-201ENST00000417088 SSH3Q8TE77 659 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms