RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SALL1Q9NSC2 1324 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 LBX1P52954 281 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 KIF23Q02241 960 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 SREBF2Q12772 1141 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 SLC10A4Q96EP9 437 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 PIH1D3Q9NQM4 214 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 RFX7Q2KHR2 1363 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
CHRNA1-206ENST00000416004 GSTO1P78417 241 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 SPATA5Q8NB90 893 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 SEC62Q99442 399 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 HIP1O00291 1037 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 ZBTB22O15209 634 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 LDHCP07864 332 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 RASAL3Q86YV0 1011 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 ANKRD13AQ8IZ07 590 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 PCDHAC2Q9Y5I4 1007 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 CSADQ9Y600 493 aa11.06□□□□□ -0.64
CHRNA1-206ENST00000416004 FAM155AB1AL88 458 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-206ENST00000416004 HSPA8P11142 646 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-206ENST00000416004 PTH1RQ03431 593 aa11.05□□□□□ -0.64
CHRNA1-206ENST00000416004 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
CHRNA1-206ENST00000416004 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
CHRNA1-206ENST00000416004 RUFY2Q8WXA3 655 aa11.05□□□□□ -0.64
CHRNA1-206ENST00000416004 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 PRDX5P30044 214 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 INHBEP58166 350 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 MAP3K11Q16584 847 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 MOB2Q70IA6 237 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 RAD50Q92878 1312 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 ALDH1A1P00352 501 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 ZMYM1Q5SVZ6 1142 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 USP40Q9NVE5 1235 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
CHRNA1-206ENST00000416004 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 M0R2C6 588 aa11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 IGSF3O75054 1194 aa11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 WDHD1O75717 1129 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 IDH1O75874 414 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 GRIK5Q16478 980 aa11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 OSBP2Q969R2 916 aa11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 TMEM39BQ9GZU3 492 aa11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 CCDC171Q6TFL3 1326 aa11.03□□□□□ -0.64
CHRNA1-206ENST00000416004 TRPA1O75762 1119 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 DIXDC1Q155Q3 683 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 LDLRAD1Q5T700 205 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 APOBEC3HQ6NTF7 200 aaKnown RBP11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 KIAA1211Q6ZU35 1233 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 FAM151AQ8WW52 585 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 CSRNP1Q96S65 589 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 DAGLAQ9Y4D2 1042 aa11.02□□□□□ -0.64
CHRNA1-206ENST00000416004 RPAP1Q9BWH6 1393 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 TCRBV5S4A2TA0A5A2 114 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 PDE6AP16499 860 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 ADD2P35612 726 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 CACNB3P54284 484 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 ZNF341Q9BYN7 854 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 HELLSQ9NRZ9 838 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 RNF186Q9NXI6 227 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
CHRNA1-206ENST00000416004 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 BAG3O95817 575 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 HSPA4P34932 840 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 MAP3K9P80192 1104 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 SPRYD7Q5W111 196 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 CDC42EP5Q6NZY7 148 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 PUS7LQ9H0K6 701 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 MROH7-TTC4A0A0A0MT08 1334 aa11.01□□□□□ -0.65
CHRNA1-206ENST00000416004 EPB41L2O43491 1005 aaKnown RBP11□□□□□ -0.65
CHRNA1-206ENST00000416004 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
CHRNA1-206ENST00000416004 PLCG2P16885 1265 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 BTDP43251 543 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 TM4SF4P48230 202 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 TCP10Q12799 353 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 RASEFQ8IZ41 740 aa11□□□□□ -0.65
CHRNA1-206ENST00000416004 APPBP2Q92624 585 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms