RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 TRPC5Q9UL62 973 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-204ENST00000415749 EIF2AK4Q9P2K8 1649 aaKnown RBP8.64□□□□□ -1.03
EPHA4-204ENST00000415749 SETD5Q9C0A6 1442 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 PLEKHG1Q9ULL1 1385 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 KDM5AP29375 1690 aaKnown RBP8.63□□□□□ -1.03
EPHA4-204ENST00000415749 ATP11AP98196 1134 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 GRM2Q14416 872 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 PRPF40BQ6NWY9 871 aaKnown RBP8.63□□□□□ -1.03
EPHA4-204ENST00000415749 LYPD4Q6UWN0 246 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 CHSY3Q70JA7 882 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 DPH6Q7L8W6 267 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
EPHA4-204ENST00000415749 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
EPHA4-204ENST00000415749 BTBD6Q96KE9 485 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 BHLHE41Q9C0J9 482 aaPredicted RBP8.63□□□□□ -1.03
EPHA4-204ENST00000415749 ZFYVE1Q9HBF4 777 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 FAM8A1Q9UBU6 413 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 DUOX2Q9NRD8 1548 aa8.63□□□□□ -1.03
EPHA4-204ENST00000415749 CHD2O14647 1828 aaKnown RBP8.63□□□□□ -1.03
EPHA4-204ENST00000415749 MAST1Q9Y2H9 1570 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 WIPF1O43516 503 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 XRCC5P13010 732 aaKnown RBP8.62□□□□□ -1.03
EPHA4-204ENST00000415749 ACPPP15309 386 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 PTPRAP18433 802 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 GSTT1P30711 240 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 LDLRAD1Q5T700 205 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-204ENST00000415749 GIMAP6Q6P9H5 292 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-204ENST00000415749 CCNJLQ8IV13 435 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 NXPE3Q969Y0 559 aa8.62□□□□□ -1.03
EPHA4-204ENST00000415749 JPH1Q9HDC5 661 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-204ENST00000415749 KIF15Q9NS87 1388 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-204ENST00000415749 NFKBIEO00221 500 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 LILRB5O75023 590 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 NCLP19338 710 aaKnown RBP8.61□□□□□ -1.03
EPHA4-204ENST00000415749 RAD51AP2Q09MP3 1159 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 NEDD1Q8NHV4 660 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 NUDT8Q8WV74 236 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 TCF12Q99081 682 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 OSBPL7Q9BZF2 842 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 TANGO6Q9C0B7 1094 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 RIMS2Q9UQ26 1411 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
EPHA4-204ENST00000415749 M0R082 166 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 ALBP02768 609 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 ZNF417Q8TAU3 575 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 ZNF587Q96SQ5 575 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-204ENST00000415749 POP1Q99575 1024 aaKnown RBP8.6□□□□□ -1.03
EPHA4-204ENST00000415749 RNF19AQ9NV58 838 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 NOS1P29475 1434 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 PIK3R4Q99570 1358 aa8.6□□□□□ -1.03
EPHA4-204ENST00000415749 TMEM238LA0A1B0GVL6 79 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 TRPA1O75762 1119 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
EPHA4-204ENST00000415749 ZNF385CQ66K41 422 aaPredicted RBP8.59□□□□□ -1.03
EPHA4-204ENST00000415749 GDF6Q6KF10 455 aaPredicted RBP8.59□□□□□ -1.03
EPHA4-204ENST00000415749 DTHD1Q6ZMT9 781 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 C20orf204Q6ZNR8 217 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 NT5DC4Q86YG4 428 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 WHAMMQ8TF30 809 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 CRELD1Q96HD1 420 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
EPHA4-204ENST00000415749 ABCB6Q9NP58 842 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 MYOM3Q5VTT5 1437 aa8.59□□□□□ -1.03
EPHA4-204ENST00000415749 ERBINQ96RT1 1412 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 A0A096LPE4 126 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 ANKRD62A6NC57 917 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 USP17L7P0C7H9 530 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 FCGRTP55899 365 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 CABP4P57796 275 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 DEFB132Q7Z7B7 95 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 METTL16Q86W50 562 aaKnown RBP8.58□□□□□ -1.04
EPHA4-204ENST00000415749 GLIS3Q8NEA6 775 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 BSNDQ8WZ55 320 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 HHIPQ96QV1 700 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 ADAM19Q9H013 955 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
EPHA4-204ENST00000415749 ADAMTS13Q76LX8 1427 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 PIK3R2O00459 728 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 CDC27P30260 824 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 ANKRD13AQ8IZ07 590 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 LACRTQ9GZZ8 138 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 RRAGCQ9HB90 399 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 PPM1HQ9ULR3 514 aa8.57□□□□□ -1.04
EPHA4-204ENST00000415749 ADGRB3O60242 1522 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms